Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC107982.3-201ENST00000584957 985 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.09□□□□□ -1.11
RFX1P22670 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.09□□□□□ -1.11
RFX1P22670 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 U1.34-201ENST00000618578 162 ntBASIC8.09□□□□□ -1.11
RFX1P22670 AC093909.6-201ENST00000624757 775 ntBASIC8.09□□□□□ -1.11
RFX1P22670 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.09□□□□□ -1.11
RFX1P22670 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.09□□□□□ -1.11
RFX1P22670 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RFX1P22670 AL096816.1-201ENST00000623300 2920 ntBASIC8.09□□□□□ -1.12
RFX1P22670 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.09□□□□□ -1.12
RFX1P22670 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
RFX1P22670 AC100871.1-201ENST00000507871 1456 ntBASIC8.08□□□□□ -1.12
RFX1P22670 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 UGT2B26P-201ENST00000508672 1613 ntBASIC8.08□□□□□ -1.12
RFX1P22670 FLJ42393-201ENST00000623801 2270 ntBASIC8.08□□□□□ -1.12
RFX1P22670 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 OR2A3P-202ENST00000641249 1776 ntBASIC8.08□□□□□ -1.12
RFX1P22670 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 RNU6-500P-201ENST00000362349 107 ntBASIC8.08□□□□□ -1.12
RFX1P22670 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
RFX1P22670 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 RPL5P5-201ENST00000392009 893 ntBASIC8.08□□□□□ -1.12
RFX1P22670 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 RN7SKP59-201ENST00000410520 314 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC127537.1-201ENST00000418183 748 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC019050.1-201ENST00000418508 492 ntBASIC8.08□□□□□ -1.12
RFX1P22670 MRPS36P1-201ENST00000421291 307 ntBASIC8.08□□□□□ -1.12
RFX1P22670 RPL5P34-201ENST00000426545 891 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC027124.1-201ENST00000440852 466 ntBASIC8.08□□□□□ -1.12
RFX1P22670 RPS7P4-201ENST00000444127 582 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 LIN28AP2-201ENST00000445283 458 ntBASIC8.08□□□□□ -1.12
RFX1P22670 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 TAAR3P-201ENST00000466706 1078 ntBASIC8.08□□□□□ -1.12
RFX1P22670 RN7SL259P-201ENST00000478499 253 ntBASIC8.08□□□□□ -1.12
RFX1P22670 TAAR3P-202ENST00000481759 1025 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AL079303.1-201ENST00000486611 463 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AL024509.2-201ENST00000493462 493 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 RPL12P7-201ENST00000493832 494 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC095059.2-201ENST00000510601 933 ntBASIC8.08□□□□□ -1.12
RFX1P22670 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 AC022447.1-201ENST00000515358 464 ntBASIC8.08□□□□□ -1.12
RFX1P22670 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 MTCYBP41-201ENST00000528913 1123 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.08□□□□□ -1.12
RFX1P22670 PCNPP1-201ENST00000552501 511 ntBASIC8.08□□□□□ -1.12
RFX1P22670 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.08□□□□□ -1.12
RFX1P22670 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 SS18L2P2-201ENST00000583960 235 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC011453.2-201ENST00000603737 729 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AL022238.3-201ENST00000609279 443 ntBASIC8.08□□□□□ -1.12
RFX1P22670 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 DLEU2_1.1-201ENST00000612089 120 ntBASIC8.08□□□□□ -1.12
RFX1P22670 AC087241.4-201ENST00000612441 480 ntBASIC8.08□□□□□ -1.12
RFX1P22670 DLEU2_1.2-201ENST00000614667 120 ntBASIC8.08□□□□□ -1.12
RFX1P22670 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC8.08□□□□□ -1.12
RFX1P22670 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 GTF2IP1-202ENST00000614592 2047 ntBASIC8.08□□□□□ -1.12
RFX1P22670 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.08□□□□□ -1.12
RFX1P22670 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC8.08□□□□□ -1.12
RFX1P22670 AC124045.1-201ENST00000606008 1953 ntBASIC8.08□□□□□ -1.12
RFX1P22670 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RFX1P22670 SAMMSON-222ENST00000641901 2727 ntBASIC8.08□□□□□ -1.12
RFX1P22670 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms