Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL136310.1-201ENST00000404926 654 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 RN7SKP188-201ENST00000410789 317 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AC096537.2-201ENST00000413707 714 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 SLC20A1P1-201ENST00000413906 956 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AL139184.1-202ENST00000422303 222 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.96□□□□□ -1.14
ERCC3P19447 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.96□□□□□ -1.14
ERCC3P19447 AC084290.1-201ENST00000434995 374 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 CASP3P1-201ENST00000446037 609 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 RBMY3AP-201ENST00000449381 1145 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 CALM1P2-201ENST00000452941 448 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 RN7SL379P-201ENST00000479912 293 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 RN7SKP196-201ENST00000516267 345 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AC087752.2-201ENST00000521219 281 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.96□□□□□ -1.14
ERCC3P19447 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.96□□□□□ -1.14
ERCC3P19447 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.96□□□□□ -1.14
ERCC3P19447 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.96□□□□□ -1.14
ERCC3P19447 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.96□□□□□ -1.14
ERCC3P19447 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.96□□□□□ -1.14
ERCC3P19447 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.96□□□□□ -1.14
ERCC3P19447 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AL121890.3-201ENST00000618494 516 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AC015660.5-201ENST00000623238 564 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 AC068213.1-201ENST00000625124 226 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.96□□□□□ -1.14
ERCC3P19447 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
ERCC3P19447 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
ERCC3P19447 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 CASC19-281ENST00000642118 1554 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.96□□□□□ -1.14
ERCC3P19447 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
ERCC3P19447 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.96□□□□□ -1.14
ERCC3P19447 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
ERCC3P19447 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.96□□□□□ -1.14
ERCC3P19447 AC010132.4-201ENST00000569883 1368 ntBASIC7.96□□□□□ -1.14
ERCC3P19447 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.95□□□□□ -1.14
ERCC3P19447 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 PPIAP26-201ENST00000377951 522 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 CASP3-203ENST00000393588 677 ntTSL 4 BASIC7.95□□□□□ -1.14
ERCC3P19447 AL035419.1-201ENST00000397037 564 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC105402.1-201ENST00000413336 545 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC114755.4-201ENST00000439114 443 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC092170.1-201ENST00000440211 356 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 RPL34P26-201ENST00000445636 354 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC7.95□□□□□ -1.14
ERCC3P19447 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 PRDX1P1-201ENST00000449329 596 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC002075.1-201ENST00000457396 676 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 RN7SL654P-201ENST00000479178 292 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC005017.1-201ENST00000482002 490 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC091951.3-201ENST00000504093 246 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 SUMO2P4-201ENST00000504193 276 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC146944.3-201ENST00000509969 371 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 MTCO3P28-201ENST00000513351 515 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.95□□□□□ -1.14
ERCC3P19447 RNA5SP278-201ENST00000517055 102 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.95□□□□□ -1.14
ERCC3P19447 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC7.95□□□□□ -1.14
ERCC3P19447 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC068726.1-201ENST00000610993 341 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms