Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGA1P17096 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGA1P17096 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGA1P17096 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HMGA1P17096 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGA1P17096 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGA1P17096 CR788268.1-201ENST00000603931 1809 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
HMGA1P17096 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGA1P17096 AC117409.1-201ENST00000470499 1310 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 AC114786.1-201ENST00000512892 1415 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 AC005224.3-201ENST00000584683 2140 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HMGA1P17096 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGA1P17096 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGA1P17096 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGA1P17096 TNPO1P1-201ENST00000423641 1138 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HMGA1P17096 AL390119.1-201ENST00000440329 312 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 NPM1P19-201ENST00000450070 712 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGA1P17096 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGA1P17096 AC006539.1-201ENST00000481419 501 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.01□□□□□ -1.45
HMGA1P17096 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.01□□□□□ -1.45
HMGA1P17096 AC074255.1-201ENST00000511259 501 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGA1P17096 AC090424.1-201ENST00000535243 736 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 AC125612.1-201ENST00000547580 377 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 AC126615.2-201ENST00000553003 515 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 HSPE1P2-201ENST00000554777 306 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGA1P17096 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.01□□□□□ -1.45
HMGA1P17096 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGA1P17096 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGA1P17096 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGA1P17096 AL117339.4-201ENST00000608335 7063 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 AC016251.2-201ENST00000623393 3089 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 WBP11P1-201ENST00000562560 1931 ntBASIC6.01□□□□□ -1.45
HMGA1P17096 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HMGA1P17096 BRD7P6-201ENST00000431406 1860 ntBASIC6□□□□□ -1.45
HMGA1P17096 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGA1P17096 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
HMGA1P17096 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HMGA1P17096 MFSD8-239ENST00000641590 2479 ntBASIC6□□□□□ -1.45
HMGA1P17096 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HMGA1P17096 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
HMGA1P17096 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
HMGA1P17096 RN7SKP162-201ENST00000363605 345 ntBASIC6□□□□□ -1.45
HMGA1P17096 RMRPP5-201ENST00000411156 267 ntBASIC6□□□□□ -1.45
HMGA1P17096 MARK2P12-201ENST00000420129 585 ntBASIC6□□□□□ -1.45
HMGA1P17096 EIF4A1P7-201ENST00000421800 1220 ntBASIC6□□□□□ -1.45
HMGA1P17096 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6□□□□□ -1.45
HMGA1P17096 AC087672.1-201ENST00000479876 766 ntBASIC6□□□□□ -1.45
HMGA1P17096 RN7SL184P-201ENST00000488308 297 ntBASIC6□□□□□ -1.45
HMGA1P17096 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6□□□□□ -1.45
HMGA1P17096 TOMM22P4-201ENST00000511318 336 ntBASIC6□□□□□ -1.45
HMGA1P17096 IGKV2-19-201ENST00000518132 283 ntBASIC6□□□□□ -1.45
HMGA1P17096 NRBF2P4-201ENST00000520874 850 ntBASIC6□□□□□ -1.45
HMGA1P17096 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6□□□□□ -1.45
HMGA1P17096 AC027026.1-201ENST00000532323 742 ntBASIC6□□□□□ -1.45
HMGA1P17096 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6□□□□□ -1.45
HMGA1P17096 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6□□□□□ -1.45
HMGA1P17096 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 AC007448.1-201ENST00000582714 234 ntBASIC6□□□□□ -1.45
HMGA1P17096 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 AP004607.3-201ENST00000530354 3915 ntBASIC6□□□□□ -1.45
HMGA1P17096 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGA1P17096 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HMGA1P17096 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6□□□□□ -1.45
HMGA1P17096 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms