Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 RPL23AP64-201ENST00000469465 435 ntBASIC6.18□□□□□ -1.42
RETP07949 PFN1P6-201ENST00000476786 399 ntBASIC6.18□□□□□ -1.42
RETP07949 AC022415.1-202ENST00000486612 523 ntBASIC6.18□□□□□ -1.42
RETP07949 RN7SL466P-201ENST00000497546 295 ntBASIC6.18□□□□□ -1.42
RETP07949 AC092593.2-201ENST00000513866 913 ntBASIC6.18□□□□□ -1.42
RETP07949 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.18□□□□□ -1.42
RETP07949 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 AP001284.1-201ENST00000528393 2118 ntBASIC6.18□□□□□ -1.42
RETP07949 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RETP07949 AC044860.2-201ENST00000561005 179 ntBASIC6.18□□□□□ -1.42
RETP07949 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.18□□□□□ -1.42
RETP07949 AC233702.7-202ENST00000582941 211 ntBASIC6.18□□□□□ -1.42
RETP07949 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 LSM1P2-201ENST00000604911 322 ntBASIC6.18□□□□□ -1.42
RETP07949 AL035661.1-201ENST00000620459 1144 ntBASIC6.18□□□□□ -1.42
RETP07949 AL136228.1-201ENST00000622221 319 ntBASIC6.18□□□□□ -1.42
RETP07949 AL691477.1-201ENST00000624398 162 ntBASIC6.18□□□□□ -1.42
RETP07949 OR8G3P-202ENST00000641572 1255 ntBASIC6.18□□□□□ -1.42
RETP07949 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RETP07949 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.18□□□□□ -1.42
RETP07949 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RETP07949 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RETP07949 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.18□□□□□ -1.42
RETP07949 AC011815.2-201ENST00000618230 2021 ntBASIC6.18□□□□□ -1.42
RETP07949 AL161912.4-201ENST00000623889 2468 ntBASIC6.18□□□□□ -1.42
RETP07949 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.18□□□□□ -1.42
RETP07949 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.18□□□□□ -1.42
RETP07949 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RETP07949 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RETP07949 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
RETP07949 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.17□□□□□ -1.42
RETP07949 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RETP07949 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
RETP07949 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RETP07949 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 PSG10P-201ENST00000501199 1500 ntBASIC6.17□□□□□ -1.42
RETP07949 HMGA1P8-201ENST00000414130 321 ntBASIC6.17□□□□□ -1.42
RETP07949 RPS17P17-201ENST00000419392 409 ntBASIC6.17□□□□□ -1.42
RETP07949 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 NIPA2P1-201ENST00000426223 976 ntBASIC6.17□□□□□ -1.42
RETP07949 AC245884.2-201ENST00000426257 404 ntBASIC6.17□□□□□ -1.42
RETP07949 RPS7P14-201ENST00000426405 583 ntBASIC6.17□□□□□ -1.42
RETP07949 H3F3BP1-201ENST00000440551 403 ntBASIC6.17□□□□□ -1.42
RETP07949 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 OR4A6P-201ENST00000534364 970 ntBASIC6.17□□□□□ -1.42
RETP07949 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.17□□□□□ -1.42
RETP07949 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.17□□□□□ -1.42
RETP07949 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.17□□□□□ -1.42
RETP07949 AP001496.3-201ENST00000580230 913 ntBASIC6.17□□□□□ -1.42
RETP07949 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.17□□□□□ -1.42
RETP07949 AC104695.2-201ENST00000605056 775 ntBASIC6.17□□□□□ -1.42
RETP07949 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RETP07949 MIR193BHG-214ENST00000641765 509 ntBASIC6.17□□□□□ -1.42
RETP07949 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
RETP07949 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.17□□□□□ -1.42
RETP07949 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RETP07949 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RETP07949 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RETP07949 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.16□□□□□ -1.42
RETP07949 AL033543.1-201ENST00000623440 13454 ntBASIC6.16□□□□□ -1.42
RETP07949 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.16□□□□□ -1.42
RETP07949 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 AC011369.2-201ENST00000624423 1567 ntBASIC6.16□□□□□ -1.42
RETP07949 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
RETP07949 MIR375-201ENST00000362103 64 ntBASIC6.16□□□□□ -1.42
RETP07949 U3.7-201ENST00000363668 216 ntBASIC6.16□□□□□ -1.42
RETP07949 AL360271.1-201ENST00000395679 510 ntBASIC6.16□□□□□ -1.42
RETP07949 RPS7P8-201ENST00000418311 581 ntBASIC6.16□□□□□ -1.42
RETP07949 RPL35AP31-201ENST00000418340 337 ntBASIC6.16□□□□□ -1.42
RETP07949 AC093155.2-201ENST00000420734 937 ntBASIC6.16□□□□□ -1.42
RETP07949 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.16□□□□□ -1.42
RETP07949 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms