Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC073909.1-201ENST00000447112 999 ntBASIC6.47□□□□□ -1.37
RB1P06400 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.47□□□□□ -1.37
RB1P06400 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 AC068522.1-201ENST00000482895 345 ntBASIC6.47□□□□□ -1.37
RB1P06400 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.47□□□□□ -1.37
RB1P06400 RN7SL57P-201ENST00000493687 290 ntBASIC6.47□□□□□ -1.37
RB1P06400 NENFP3-201ENST00000503735 313 ntBASIC6.47□□□□□ -1.37
RB1P06400 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 EIF1AXP2-201ENST00000555940 413 ntBASIC6.47□□□□□ -1.37
RB1P06400 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.47□□□□□ -1.37
RB1P06400 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 AC092944.2-201ENST00000605443 889 ntBASIC6.47□□□□□ -1.37
RB1P06400 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RB1P06400 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RB1P06400 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.47□□□□□ -1.37
RB1P06400 NCOA4P2-201ENST00000340589 1813 ntBASIC6.47□□□□□ -1.37
RB1P06400 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.47□□□□□ -1.37
RB1P06400 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.47□□□□□ -1.37
RB1P06400 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 UGT2B27P-201ENST00000505092 1620 ntBASIC6.47□□□□□ -1.37
RB1P06400 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RB1P06400 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RB1P06400 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RB1P06400 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
RB1P06400 CASC19-255ENST00000641733 1385 ntBASIC6.46□□□□□ -1.37
RB1P06400 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RB1P06400 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
RB1P06400 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.46□□□□□ -1.37
RB1P06400 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RB1P06400 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RB1P06400 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 SNORA58B-201ENST00000364259 136 ntBASIC6.46□□□□□ -1.38
RB1P06400 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.46□□□□□ -1.38
RB1P06400 UBE2V1P14-201ENST00000415815 558 ntBASIC6.46□□□□□ -1.38
RB1P06400 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.46□□□□□ -1.38
RB1P06400 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.46□□□□□ -1.38
RB1P06400 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.46□□□□□ -1.38
RB1P06400 SPRYD7P1-201ENST00000443861 570 ntBASIC6.46□□□□□ -1.38
RB1P06400 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.46□□□□□ -1.38
RB1P06400 RN7SL799P-201ENST00000475891 298 ntBASIC6.46□□□□□ -1.38
RB1P06400 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 OR2A3P-201ENST00000493774 953 ntBASIC6.46□□□□□ -1.38
RB1P06400 AC108693.1-201ENST00000496068 432 ntBASIC6.46□□□□□ -1.38
RB1P06400 AC023818.1-201ENST00000498379 384 ntBASIC6.46□□□□□ -1.38
RB1P06400 MORF4L2P1-201ENST00000503761 858 ntBASIC6.46□□□□□ -1.38
RB1P06400 GAPDHP71-201ENST00000511530 1003 ntBASIC6.46□□□□□ -1.38
RB1P06400 CCNHP1-201ENST00000513311 678 ntBASIC6.46□□□□□ -1.38
RB1P06400 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.46□□□□□ -1.38
RB1P06400 AP000662.1-201ENST00000530952 487 ntBASIC6.46□□□□□ -1.38
RB1P06400 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.46□□□□□ -1.38
RB1P06400 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RB1P06400 AC020916.2-201ENST00000591242 360 ntBASIC6.46□□□□□ -1.38
RB1P06400 AL035661.1-201ENST00000620459 1144 ntBASIC6.46□□□□□ -1.38
RB1P06400 OR7A1P-202ENST00000641542 1158 ntBASIC6.46□□□□□ -1.38
RB1P06400 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
RB1P06400 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.46□□□□□ -1.38
RB1P06400 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RB1P06400 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 AL137058.3-201ENST00000624531 3099 ntBASIC6.45□□□□□ -1.38
RB1P06400 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.45□□□□□ -1.38
RB1P06400 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RB1P06400 SNORA64.1-201ENST00000362600 132 ntBASIC6.45□□□□□ -1.38
RB1P06400 SNORA74A-201ENST00000364089 198 ntBASIC6.45□□□□□ -1.38
RB1P06400 MIR433-201ENST00000384837 93 ntBASIC6.45□□□□□ -1.38
RB1P06400 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RB1P06400 AL391422.1-201ENST00000402155 436 ntBASIC6.45□□□□□ -1.38
RB1P06400 AK4P4-201ENST00000419465 646 ntBASIC6.45□□□□□ -1.38
RB1P06400 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.45□□□□□ -1.38
RB1P06400 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.45□□□□□ -1.38
RB1P06400 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 RN7SL610P-201ENST00000463845 291 ntBASIC6.45□□□□□ -1.38
RB1P06400 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.45□□□□□ -1.38
RB1P06400 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms