Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 AL354692.1-201ENST00000423044 315 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 CHEK2P5-201ENST00000423877 246 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC104164.1-201ENST00000460282 590 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AGGF1P3-201ENST00000493675 1213 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC008629.2-201ENST00000503783 483 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC096754.1-201ENST00000508904 818 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC011411.1-201ENST00000509592 876 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC110760.3-202ENST00000515177 371 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 AL356801.1-201ENST00000559320 294 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 MTND2P13-201ENST00000577438 1039 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC119403.2-201ENST00000590960 598 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 RNF19BPY-201ENST00000458209 1550 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.11□□□□□ -1.27
HLA-DOAP06340 LINC01616-201ENST00000561816 2280 ntBASIC7.11□□□□□ -1.27
HLA-DOAP06340 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HLA-DOAP06340 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC079753.1-201ENST00000623243 3868 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC008171.1-201ENST00000395058 200 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 DHFRP5-201ENST00000406944 564 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 BX119904.3-201ENST00000428194 957 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 HMGN1P36-201ENST00000446623 298 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 RN7SL165P-201ENST00000477476 291 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 RN7SL57P-201ENST00000493687 290 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC118282.1-201ENST00000506408 765 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AC011497.2-201ENST00000600255 639 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AP005431.1-201ENST00000618479 319 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HLA-DOAP06340 PABPC1P8-201ENST00000452851 2086 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HLA-DOAP06340 AL031651.1-201ENST00000615357 1438 ntBASIC7.1□□□□□ -1.27
HLA-DOAP06340 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 PDZK1P1-202ENST00000425209 1350 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 PARP4P2-201ENST00000446672 3326 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 RNU4-23P-201ENST00000362839 140 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 SNORD8-201ENST00000363915 110 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC087752.1-201ENST00000391360 558 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 OR7E101P-201ENST00000400428 513 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC126120.1-201ENST00000431082 470 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AL445928.1-201ENST00000435545 222 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms