Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DPY19L1P2-201ENST00000426647 915 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.21□□□□□ -1.26
PDGFAP04085 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 AL354983.1-201ENST00000434580 906 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 MED28P8-201ENST00000454831 521 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 RN7SL36P-201ENST00000469345 276 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 AC079841.1-201ENST00000481228 950 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 SETP14-201ENST00000497538 873 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 AC096661.1-201ENST00000515870 822 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 RN7SKP298-201ENST00000515950 94 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC087360.1-201ENST00000518788 616 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 OR11J2P-201ENST00000555298 907 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 GTF2IP8-201ENST00000560687 584 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC009063.1-201ENST00000563342 702 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 DNM1P33-201ENST00000565222 270 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 RN7SL131P-201ENST00000579043 256 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AL606760.4-201ENST00000617613 718 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.21□□□□□ -1.26
PDGFAP04085 OR5AK4P-201ENST00000635912 903 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PDGFAP04085 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PDGFAP04085 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
PDGFAP04085 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 LYARP1-201ENST00000436977 1501 ntBASIC7.21□□□□□ -1.26
PDGFAP04085 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PDGFAP04085 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDGFAP04085 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 AL136981.1-203ENST00000451452 3844 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 GTF2IP1-202ENST00000614592 2047 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.2□□□□□ -1.26
PDGFAP04085 AL136146.1-201ENST00000529830 1667 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 BX322650.1-201ENST00000332359 2143 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 RNU6-797P-201ENST00000363101 109 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 Y_RNA.302-201ENST00000364997 102 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AL450124.1-201ENST00000376401 353 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 RNA5SP35-201ENST00000391257 129 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 CYCSP45-201ENST00000402289 315 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 RN7SKP127-201ENST00000410443 354 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 CCDC58P2-201ENST00000417131 366 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 GAPDHP49-201ENST00000421421 961 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PDGFAP04085 FBP2P1-202ENST00000424473 530 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PDGFAP04085 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 GAPDHP32-201ENST00000433816 998 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 PA2G4P1-201ENST00000442248 1197 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 FO393419.1-201ENST00000443746 355 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 AL451074.1-202ENST00000453762 989 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC083906.4-201ENST00000514634 987 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC084337.1-201ENST00000524809 686 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AP000445.1-201ENST00000526692 741 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 FOLH1B-202ENST00000529567 2145 ntBASIC7.2□□□□□ -1.26
PDGFAP04085 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.2□□□□□ -1.26
PDGFAP04085 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.2□□□□□ -1.26
PDGFAP04085 MIR3137-201ENST00000577367 75 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms