Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
APOEP02649 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
APOEP02649 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
APOEP02649 AL442128.2-201ENST00000620246 1824 ntBASIC6.25□□□□□ -1.41
APOEP02649 PSG10P-201ENST00000501199 1500 ntBASIC6.25□□□□□ -1.41
APOEP02649 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.25□□□□□ -1.41
APOEP02649 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.25□□□□□ -1.41
APOEP02649 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
APOEP02649 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.24□□□□□ -1.41
APOEP02649 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
APOEP02649 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.24□□□□□ -1.41
APOEP02649 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
APOEP02649 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 AL731534.1-201ENST00000434711 269 ntBASIC6.24□□□□□ -1.41
APOEP02649 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.24□□□□□ -1.41
APOEP02649 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 HMGN1P2-201ENST00000445197 310 ntBASIC6.24□□□□□ -1.41
APOEP02649 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
APOEP02649 CST12P-201ENST00000457644 362 ntBASIC6.24□□□□□ -1.41
APOEP02649 AC104164.1-201ENST00000460282 590 ntBASIC6.24□□□□□ -1.41
APOEP02649 CCDC11P1-201ENST00000503137 1162 ntBASIC6.24□□□□□ -1.41
APOEP02649 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 SETP21-201ENST00000514799 892 ntBASIC6.24□□□□□ -1.41
APOEP02649 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 AC110056.1-201ENST00000525759 911 ntBASIC6.24□□□□□ -1.41
APOEP02649 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
APOEP02649 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 NDUFA5P11-201ENST00000567995 343 ntBASIC6.24□□□□□ -1.41
APOEP02649 AC005244.1-201ENST00000582566 339 ntBASIC6.24□□□□□ -1.41
APOEP02649 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.24□□□□□ -1.41
APOEP02649 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
APOEP02649 MIR132-201ENST00000591554 101 ntBASIC6.24□□□□□ -1.41
APOEP02649 AC108673.3-201ENST00000609183 335 ntBASIC6.24□□□□□ -1.41
APOEP02649 AL136228.1-201ENST00000622221 319 ntBASIC6.24□□□□□ -1.41
APOEP02649 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
APOEP02649 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
APOEP02649 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.24□□□□□ -1.41
APOEP02649 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
APOEP02649 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
APOEP02649 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.24□□□□□ -1.41
APOEP02649 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
APOEP02649 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.23□□□□□ -1.41
APOEP02649 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
APOEP02649 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
APOEP02649 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
APOEP02649 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 OR56A4-201ENST00000330728 1209 ntBASIC6.23□□□□□ -1.41
APOEP02649 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
APOEP02649 SUGT1P2-201ENST00000379452 992 ntBASIC6.23□□□□□ -1.41
APOEP02649 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
APOEP02649 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 TUBB4BP6-201ENST00000437576 479 ntBASIC6.23□□□□□ -1.41
APOEP02649 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 AC023245.1-201ENST00000468501 517 ntBASIC6.23□□□□□ -1.41
APOEP02649 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
APOEP02649 WBP1LP3-201ENST00000523033 208 ntBASIC6.23□□□□□ -1.41
APOEP02649 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 LINC00556-201ENST00000569603 412 ntBASIC6.23□□□□□ -1.41
APOEP02649 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.23□□□□□ -1.41
APOEP02649 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.23□□□□□ -1.41
APOEP02649 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.23□□□□□ -1.41
APOEP02649 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
APOEP02649 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.23□□□□□ -1.41
APOEP02649 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.23□□□□□ -1.41
APOEP02649 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
APOEP02649 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.23□□□□□ -1.41
APOEP02649 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms