Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
GPC4O75487 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
GPC4O75487 AC092070.2-203ENST00000598377 3644 ntBASIC6.06□□□□□ -1.44
GPC4O75487 UGT2B24P-201ENST00000514441 1597 ntBASIC6.06□□□□□ -1.44
GPC4O75487 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.06□□□□□ -1.44
GPC4O75487 SNORD1C-201ENST00000363315 78 ntBASIC6.06□□□□□ -1.44
GPC4O75487 RN7SKP171-201ENST00000364417 303 ntBASIC6.06□□□□□ -1.44
GPC4O75487 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.06□□□□□ -1.44
GPC4O75487 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GPC4O75487 RN7SKP144-201ENST00000411108 279 ntBASIC6.06□□□□□ -1.44
GPC4O75487 MTND4LP21-201ENST00000415303 295 ntBASIC6.06□□□□□ -1.44
GPC4O75487 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.06□□□□□ -1.44
GPC4O75487 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.06□□□□□ -1.44
GPC4O75487 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 AC092865.3-201ENST00000425390 1026 ntBASIC6.06□□□□□ -1.44
GPC4O75487 RPSAP65-201ENST00000429660 595 ntBASIC6.06□□□□□ -1.44
GPC4O75487 IGLV3-4-201ENST00000432300 244 ntBASIC6.06□□□□□ -1.44
GPC4O75487 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AC073594.1-201ENST00000462065 364 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AC012123.2-201ENST00000485809 248 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AL035690.1-201ENST00000490892 383 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.06□□□□□ -1.44
GPC4O75487 AC113367.2-201ENST00000505749 160 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AC091874.2-201ENST00000505889 720 ntBASIC6.06□□□□□ -1.44
GPC4O75487 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.06□□□□□ -1.44
GPC4O75487 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.06□□□□□ -1.44
GPC4O75487 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.06□□□□□ -1.44
GPC4O75487 NPIPB14P-203ENST00000532298 987 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.06□□□□□ -1.44
GPC4O75487 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 AC008555.7-201ENST00000605008 583 ntBASIC6.06□□□□□ -1.44
GPC4O75487 RPL12P48-201ENST00000605620 304 ntBASIC6.06□□□□□ -1.44
GPC4O75487 MSL3P1-202ENST00000440028 1468 ntBASIC6.06□□□□□ -1.44
GPC4O75487 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GPC4O75487 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GPC4O75487 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.06□□□□□ -1.44
GPC4O75487 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.06□□□□□ -1.44
GPC4O75487 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.06□□□□□ -1.44
GPC4O75487 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.06□□□□□ -1.44
GPC4O75487 AC114876.1-201ENST00000490962 1366 ntBASIC6.06□□□□□ -1.44
GPC4O75487 PPBPP2-201ENST00000513150 1362 ntBASIC6.06□□□□□ -1.44
GPC4O75487 AC140134.1-201ENST00000511830 3544 ntBASIC6.05□□□□□ -1.44
GPC4O75487 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 AC090181.3-201ENST00000624777 1514 ntBASIC6.05□□□□□ -1.44
GPC4O75487 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 EIF3EP1-201ENST00000433978 1316 ntBASIC6.05□□□□□ -1.44
GPC4O75487 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 CDY11P-201ENST00000447168 1651 ntBASIC6.05□□□□□ -1.44
GPC4O75487 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 AL442128.2-201ENST00000620246 1824 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.05□□□□□ -1.44
GPC4O75487 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.05□□□□□ -1.44
GPC4O75487 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 AL139158.1-201ENST00000424719 340 ntBASIC6.05□□□□□ -1.44
GPC4O75487 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 AC108479.1-201ENST00000431142 427 ntBASIC6.05□□□□□ -1.44
GPC4O75487 OR3D1P-201ENST00000438288 955 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.05□□□□□ -1.44
GPC4O75487 TIMM8BP2-201ENST00000445940 251 ntBASIC6.05□□□□□ -1.44
GPC4O75487 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.05□□□□□ -1.44
GPC4O75487 RAB28P2-201ENST00000454299 641 ntBASIC6.05□□□□□ -1.44
GPC4O75487 snoU13.29-201ENST00000459370 104 ntBASIC6.05□□□□□ -1.44
GPC4O75487 HMGN1P8-201ENST00000463578 288 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.05□□□□□ -1.44
GPC4O75487 EIF4E2P2-201ENST00000492033 736 ntBASIC6.05□□□□□ -1.44
GPC4O75487 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 AC008945.1-201ENST00000505144 499 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AC112484.3-201ENST00000505910 329 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.05□□□□□ -1.44
GPC4O75487 RNA5SP441-201ENST00000516809 88 ntBASIC6.05□□□□□ -1.44
GPC4O75487 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.05□□□□□ -1.44
GPC4O75487 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.05□□□□□ -1.44
GPC4O75487 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.05□□□□□ -1.44
GPC4O75487 AL049874.4-201ENST00000557593 255 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AC004890.3-201ENST00000605566 1095 ntBASIC6.05□□□□□ -1.44
GPC4O75487 AL359091.2-201ENST00000609303 556 ntBASIC6.05□□□□□ -1.44
GPC4O75487 MIR6721-201ENST00000617181 87 ntBASIC6.05□□□□□ -1.44
GPC4O75487 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.05□□□□□ -1.44
GPC4O75487 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.05□□□□□ -1.44
GPC4O75487 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
GPC4O75487 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GPC4O75487 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.05□□□□□ -1.44
GPC4O75487 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms