Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC106782.4-201ENST00000568264 210 ntBASIC2.47□□□□□ -2.01
USH2AO75445 MIR4737-201ENST00000583979 81 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AL512782.1-201ENST00000603093 364 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AL161756.2-201ENST00000604597 246 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC018816.2-201ENST00000621460 353 ntBASIC2.47□□□□□ -2.01
USH2AO75445 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 NSF-206ENST00000575068 2667 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
USH2AO75445 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
USH2AO75445 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 RNU6-525P-201ENST00000363685 104 ntBASIC2.47□□□□□ -2.01
USH2AO75445 U3.22-201ENST00000391120 215 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
USH2AO75445 AC024940.3-201ENST00000538551 316 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC2.47□□□□□ -2.01
USH2AO75445 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC004232.3-201ENST00000622977 525 ntBASIC2.47□□□□□ -2.01
USH2AO75445 CASC15-203ENST00000605917 4461 ntBASIC2.47□□□□□ -2.01
USH2AO75445 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 LRRC37A17P-201ENST00000570311 4693 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 ACTR3BP5-201ENST00000448440 1479 ntBASIC2.47□□□□□ -2.01
USH2AO75445 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC2.47□□□□□ -2.01
USH2AO75445 RPL23AP60-201ENST00000450011 454 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC2.47□□□□□ -2.01
USH2AO75445 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC2.47□□□□□ -2.01
USH2AO75445 MIR4260-201ENST00000583107 67 ntBASIC2.47□□□□□ -2.01
USH2AO75445 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC2.47□□□□□ -2.01
USH2AO75445 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC2.47□□□□□ -2.01
USH2AO75445 uc_338.26-201ENST00000612659 160 ntBASIC2.47□□□□□ -2.01
USH2AO75445 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
USH2AO75445 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
USH2AO75445 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 AC022893.2-201ENST00000564832 3296 ntBASIC2.47□□□□□ -2.01
USH2AO75445 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 RNU11-6P-201ENST00000391127 133 ntBASIC2.47□□□□□ -2.01
USH2AO75445 RPSAP35-201ENST00000413753 818 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC004074.1-201ENST00000421810 1063 ntBASIC2.47□□□□□ -2.01
USH2AO75445 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 EIF3KP3-201ENST00000514461 639 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC2.47□□□□□ -2.01
USH2AO75445 AC007494.1-201ENST00000562293 760 ntBASIC2.47□□□□□ -2.01
USH2AO75445 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 AC020765.1-201ENST00000604296 328 ntBASIC2.47□□□□□ -2.01
USH2AO75445 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
USH2AO75445 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC2.47□□□□□ -2.01
USH2AO75445 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.47□□□□□ -2.01
USH2AO75445 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USH2AO75445 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.01
USH2AO75445 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
USH2AO75445 RPL31-204ENST00000409038 817 ntTSL 2 BASIC2.46□□□□□ -2.01
USH2AO75445 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC2.46□□□□□ -2.01
USH2AO75445 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC2.46□□□□□ -2.01
USH2AO75445 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC2.46□□□□□ -2.01
USH2AO75445 AC104634.1-201ENST00000452720 462 ntBASIC2.46□□□□□ -2.01
USH2AO75445 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC2.46□□□□□ -2.01
USH2AO75445 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms