Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 OR52H2P-201ENST00000514607 902 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC117525.1-201ENST00000515228 503 ntBASIC5.6□□□□□ -1.51
SSX4O60224 SNORA74.1-201ENST00000516320 180 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX4O60224 RPL3P13-201ENST00000550415 216 ntBASIC5.6□□□□□ -1.51
SSX4O60224 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 AL078601.3-201ENST00000573303 535 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC133552.4-201ENST00000576103 676 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX4O60224 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX4O60224 GLYATL1P2-202ENST00000588046 902 ntBASIC5.6□□□□□ -1.51
SSX4O60224 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 AL589863.1-201ENST00000595383 631 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 AC125494.2-201ENST00000602431 657 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC025857.2-201ENST00000602711 238 ntBASIC5.6□□□□□ -1.51
SSX4O60224 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX4O60224 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.6□□□□□ -1.51
SSX4O60224 RN7SL261P-201ENST00000613441 282 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC069234.4-201ENST00000621276 412 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AL359742.1-201ENST00000622497 540 ntBASIC5.6□□□□□ -1.51
SSX4O60224 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
SSX4O60224 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX4O60224 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSX4O60224 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SSX4O60224 AL161912.4-201ENST00000623889 2468 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX4O60224 AC012078.1-201ENST00000405035 1646 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AP000473.2-201ENST00000602659 1537 ntBASIC5.59□□□□□ -1.51
SSX4O60224 Z83820.1-201ENST00000456978 1499 ntBASIC5.59□□□□□ -1.51
SSX4O60224 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 ADAM24P-201ENST00000398655 2101 ntBASIC5.59□□□□□ -1.51
SSX4O60224 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX4O60224 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX4O60224 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 RPL11P4-201ENST00000332269 436 ntBASIC5.59□□□□□ -1.51
SSX4O60224 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 RNA5SP433-201ENST00000364491 114 ntBASIC5.59□□□□□ -1.51
SSX4O60224 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX4O60224 AC003045.1-201ENST00000398779 713 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AL049697.3-201ENST00000406493 982 ntBASIC5.59□□□□□ -1.51
SSX4O60224 NACAP7-201ENST00000407371 609 ntBASIC5.59□□□□□ -1.51
SSX4O60224 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 RNA5SP431-201ENST00000410312 120 ntBASIC5.59□□□□□ -1.51
SSX4O60224 RN7SKP296-201ENST00000411185 341 ntBASIC5.59□□□□□ -1.51
SSX4O60224 RAB9AP4-201ENST00000415230 609 ntBASIC5.59□□□□□ -1.51
SSX4O60224 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX4O60224 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 AC106901.1-201ENST00000425086 698 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX4O60224 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 AC079807.1-201ENST00000429993 481 ntBASIC5.59□□□□□ -1.51
SSX4O60224 RPL12P16-201ENST00000431098 498 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 USP24P1-201ENST00000433802 779 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 GAPDHP59-201ENST00000435908 267 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 AL500527.1-201ENST00000448532 255 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AP002884.1-201ENST00000479691 655 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX4O60224 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX4O60224 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 IGKV2-4-201ENST00000523070 340 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.59□□□□□ -1.51
SSX4O60224 AC006512.2-201ENST00000543250 486 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX4O60224 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX4O60224 AC002310.3-201ENST00000569728 723 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX4O60224 AC245052.7-201ENST00000601161 359 ntBASIC5.59□□□□□ -1.51
SSX4O60224 BUB1P1-201ENST00000603541 607 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX4O60224 AC025262.3-201ENST00000623666 360 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX4O60224 MIR1910-201ENST00000636955 80 ntBASIC5.59□□□□□ -1.51
SSX4O60224 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.59□□□□□ -1.51
SSX4O60224 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 AC004158.1-201ENST00000564508 4319 ntBASIC5.59□□□□□ -1.51
SSX4O60224 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.59□□□□□ -1.51
SSX4O60224 ICE2P1-201ENST00000512800 1849 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms