Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.12□□□□□ -1.43
SMAD6O43541 AC114781.3-201ENST00000512083 142 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC060775.1-201ENST00000518241 520 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SMAD6O43541 TPM3P3-201ENST00000521343 354 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 MTND1P36-201ENST00000522384 936 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.12□□□□□ -1.43
SMAD6O43541 OR56A7P-201ENST00000524865 941 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 TRIM51DP-201ENST00000529746 596 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.12□□□□□ -1.43
SMAD6O43541 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.12□□□□□ -1.43
SMAD6O43541 AL158211.1-201ENST00000566763 763 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 AC016839.1-201ENST00000578162 867 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC005244.1-201ENST00000582566 339 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC119403.2-201ENST00000590960 598 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 AL354950.1-201ENST00000614150 568 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AL096712.1-201ENST00000614561 159 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 AC018659.2-201ENST00000624690 715 ntBASIC6.12□□□□□ -1.43
SMAD6O43541 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SMAD6O43541 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMAD6O43541 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 AC091305.2-201ENST00000624049 1576 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
SMAD6O43541 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.11□□□□□ -1.43
SMAD6O43541 BRAFP1-201ENST00000445336 2703 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.11□□□□□ -1.43
SMAD6O43541 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SMAD6O43541 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.11□□□□□ -1.43
SMAD6O43541 OR10R3P-201ENST00000361688 942 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 VN1R110P-201ENST00000438988 971 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.11□□□□□ -1.43
SMAD6O43541 RPL12P11-201ENST00000439970 501 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.11□□□□□ -1.43
SMAD6O43541 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.11□□□□□ -1.43
SMAD6O43541 AC092865.4-201ENST00000477936 615 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.11□□□□□ -1.43
SMAD6O43541 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.11□□□□□ -1.43
SMAD6O43541 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.11□□□□□ -1.43
SMAD6O43541 AC110056.1-201ENST00000525759 911 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.11□□□□□ -1.43
SMAD6O43541 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.11□□□□□ -1.43
SMAD6O43541 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 AC105036.1-201ENST00000566222 271 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 MIR4310-201ENST00000582950 57 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 MIR6793-201ENST00000612376 63 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 uc_338.26-201ENST00000612659 160 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AC129778.1-202ENST00000623812 261 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AL162377.2-201ENST00000624532 337 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AL591379.1-207ENST00000635982 261 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 AC068769.1-201ENST00000474767 2426 ntBASIC6.11□□□□□ -1.43
SMAD6O43541 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SMAD6O43541 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.11□□□□□ -1.43
SMAD6O43541 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
SMAD6O43541 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMAD6O43541 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.11□□□□□ -1.43
SMAD6O43541 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 AC009779.8-201ENST00000641684 4384 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.1□□□□□ -1.43
SMAD6O43541 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms