Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC108120.2-201ENST00000512973 294 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 SEPT10P1-201ENST00000517342 1162 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 ST13P6-201ENST00000522430 1102 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 OR9G2P-201ENST00000533326 880 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA3O43365 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXA3O43365 CYP2C60P-201ENST00000566088 139 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC106791.2-201ENST00000604680 391 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 AL392112.1-201ENST00000605115 829 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXA3O43365 LINC01808-202ENST00000641680 1116 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXA3O43365 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXA3O43365 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA3O43365 AC117409.1-201ENST00000470499 1310 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA3O43365 HSPA8P11-201ENST00000508840 1898 ntBASIC5.71□□□□□ -1.5
HOXA3O43365 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXA3O43365 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXA3O43365 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 AL121835.2-201ENST00000624253 3502 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXA3O43365 NACA3P-201ENST00000359690 648 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
HOXA3O43365 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXA3O43365 RNU6-157P-201ENST00000383957 107 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXA3O43365 HNRNPH1P2-201ENST00000396845 1210 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 RPL23AP59-201ENST00000399415 461 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 MIR1266-201ENST00000408125 84 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 TAF13P2-201ENST00000416876 286 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 AC006960.1-201ENST00000419980 153 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA3O43365 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 ANKRD54P1-201ENST00000433115 471 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 RPEP4-201ENST00000437636 602 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 SALL1P1-201ENST00000438101 3837 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 AL360221.1-201ENST00000445989 335 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 KF459542.1-201ENST00000450908 553 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA3O43365 PSPC1P2-201ENST00000455130 225 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 BX323845.2-201ENST00000458382 234 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 RN7SL492P-201ENST00000460700 295 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 AP000805.1-201ENST00000471604 784 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 AC044810.1-201ENST00000480271 711 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 RN7SL502P-201ENST00000481857 290 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 LINC00888-204ENST00000487386 421 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA3O43365 AC022296.2-201ENST00000512424 202 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXA3O43365 RPL12P22-201ENST00000519073 490 ntBASIC5.7□□□□□ -1.5
HOXA3O43365 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXA3O43365 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXA3O43365 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms