Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 CASC19-260ENST00000641828 2001 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 LYARP1-201ENST00000436977 1501 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 RNA5SP122-201ENST00000384457 108 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 SNORA77.2-201ENST00000408571 112 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 AC092651.1-201ENST00000426110 312 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC002075.1-201ENST00000457396 676 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC095052.1-201ENST00000509955 863 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 RNA5SP400-201ENST00000517155 111 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 AC011853.1-201ENST00000518911 454 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 IGKV2-4-201ENST00000523070 340 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 OR5D2P-201ENST00000524390 911 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC092865.1-201ENST00000544395 1023 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.38□□□□□ -1.71
NACAE9PAV3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 LINC00556-201ENST00000569603 412 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 MIR6861-201ENST00000618657 64 ntBASIC4.38□□□□□ -1.71
NACAE9PAV3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.38□□□□□ -1.71
NACAE9PAV3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.38□□□□□ -1.71
NACAE9PAV3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.38□□□□□ -1.71
NACAE9PAV3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NACAE9PAV3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AL359885.1-201ENST00000415786 903 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.37□□□□□ -1.71
NACAE9PAV3 MTND2P12-201ENST00000417560 1252 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC016027.5-201ENST00000427227 210 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 YY1P1-201ENST00000427625 668 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 RPL34P27-201ENST00000428810 349 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC069154.1-201ENST00000432914 542 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC009879.1-201ENST00000520029 839 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AL845552.1-201ENST00000556820 323 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 TPRX1P1-201ENST00000557620 319 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AC005632.2-201ENST00000564271 828 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.37□□□□□ -1.71
NACAE9PAV3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AC067773.1-201ENST00000603284 1094 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC004801.6-201ENST00000616571 978 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AL512652.1-201ENST00000619006 500 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AL109924.4-201ENST00000623089 670 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 AL359091.1-201ENST00000449048 1734 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NACAE9PAV3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.37□□□□□ -1.71
NACAE9PAV3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
NACAE9PAV3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NACAE9PAV3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NACAE9PAV3 AC004386.1-201ENST00000393214 761 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 HMGN1P20-201ENST00000411849 300 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 UBE2V1P14-201ENST00000415815 558 ntBASIC4.37□□□□□ -1.71
NACAE9PAV3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.37□□□□□ -1.71
NACAE9PAV3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.37□□□□□ -1.71
NACAE9PAV3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms