Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC232271.1-201ENST00000602455 2715 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RN7SKP17-201ENST00000411242 351 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC073410.1-201ENST00000435125 589 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPS3AP38-201ENST00000435889 763 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CFL1P4-201ENST00000451536 498 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC018638.3-201ENST00000461273 132 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC093719.1-201ENST00000480427 441 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC124945.1-201ENST00000485133 188 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TRBV5-2-201ENST00000489095 273 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC104109.1-201ENST00000498563 436 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC006499.4-201ENST00000510947 694 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OR5H7P-201ENST00000514084 930 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RNA5SP340-201ENST00000517132 107 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC008521.2-201ENST00000591021 259 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC108865.2-201ENST00000606881 432 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC073488.3-201ENST00000631611 778 ntBASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPL12P12-201ENST00000424633 501 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPS29P14-201ENST00000431518 171 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 HLA-DPA3-207ENST00000454398 229 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC084754.1-201ENST00000463466 464 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC092865.4-201ENST00000477936 615 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RPL23AP40-201ENST00000487630 390 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 IGLVIV-64-201ENST00000518581 301 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC244502.2-201ENST00000543361 851 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 FO681491.1-202ENST00000623392 737 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC016583.1-201ENST00000624221 2431 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC008627.1-201ENST00000517511 1704 ntBASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC087516.1-201ENST00000561236 2428 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms