Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HMGB1P47-201ENST00000511281 589 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 VTA1P2-201ENST00000520205 911 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC130365.2-201ENST00000525882 1201 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC007956.1-201ENST00000555623 542 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC104072.1-201ENST00000568817 668 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC027216.1-201ENST00000577726 685 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC006116.7-201ENST00000590141 756 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AP001823.1-201ENST00000604056 1003 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AL157899.1-201ENST00000604110 936 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 CYCSP1-201ENST00000604815 315 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 OR51C1P-201ENST00000608504 942 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AL163051.2-201ENST00000618976 735 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 MRPL57P1-201ENST00000621486 265 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC090772.4-201ENST00000623599 362 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 AC103703.1-201ENST00000634783 663 ntBASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC187A0A096LP49 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AL356968.2-201ENST00000412769 1257 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 RAB9AP4-201ENST00000415230 609 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 SFR1P2-201ENST00000421841 730 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 RPL31P15-201ENST00000449770 338 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 ACA64.1-201ENST00000459171 127 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC022336.1-201ENST00000475510 337 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC093719.1-201ENST00000480427 441 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 PPIAP19-201ENST00000486414 492 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 RPL5P11-201ENST00000498068 893 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AL158068.1-201ENST00000506116 616 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 GOLGA5P1-201ENST00000507317 980 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 RNU6-319P-201ENST00000516025 108 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 RNA5SP271-201ENST00000516700 88 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 SCARNA1-201ENST00000517138 166 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AP001496.3-201ENST00000580230 913 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC090616.1-201ENST00000583895 447 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 MIR4760-201ENST00000585040 80 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC005332.4-201ENST00000592752 579 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC073333.2-201ENST00000603589 769 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC097504.2-201ENST00000608088 454 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC005393.1-201ENST00000617916 584 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC022960.3-201ENST00000619794 441 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC079298.2-201ENST00000623885 459 ntBASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC187A0A096LP49 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 AC007485.2-201ENST00000623493 1667 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 OR10AB1P-202ENST00000641219 1686 ntBASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC187A0A096LP49 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms