Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHB1Q9Y5F3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 PPIAP24-201ENST00000328558 471 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 RNA5SP485-201ENST00000365053 119 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 U3.52-201ENST00000384034 216 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 YWHAZP6-201ENST00000399764 738 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MTCO2P8-201ENST00000412213 658 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 RANP6-201ENST00000413691 644 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MRPS21P5-201ENST00000417885 231 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 RPL23AP85-201ENST00000421838 433 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC007679.3-201ENST00000434035 414 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MTND1P26-201ENST00000440488 538 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 PRELID3BP6-201ENST00000503839 571 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC021087.2-201ENST00000504656 1203 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC091874.2-201ENST00000505889 720 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC091965.3-201ENST00000506236 208 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC096571.1-202ENST00000506634 735 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 CIR1P1-201ENST00000524055 1133 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC084337.1-201ENST00000524809 686 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC087894.1-201ENST00000538359 518 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MIR4502-201ENST00000580432 81 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC026741.1-201ENST00000605892 482 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AP005229.2-201ENST00000609980 697 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 U1.41-201ENST00000617626 165 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MIR6729-201ENST00000618194 65 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC097655.1-201ENST00000635075 318 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 OR5AC4P-202ENST00000642086 985 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC008691.1-209ENST00000642094 814 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AL356317.1-201ENST00000396110 1436 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 AC023245.2-201ENST00000530760 2978 ntBASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB1Q9Y5F3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB1Q9Y5F3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB1Q9Y5F3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB1Q9Y5F3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB1Q9Y5F3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDHB1Q9Y5F3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
PCDHB1Q9Y5F3 QRSL1P1-201ENST00000400977 1540 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms