Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL121594.2-201ENST00000541658 472 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AC023080.1-201ENST00000551663 931 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AL713998.2-201ENST00000604538 1198 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 SNORA74.4-201ENST00000607595 199 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AL356752.1-201ENST00000615844 593 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 MIR6133-201ENST00000617057 108 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AC027279.1-201ENST00000568885 4284 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 AP005432.1-201ENST00000580891 3485 ntBASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RCL1Q9Y2P8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AP001284.1-201ENST00000528393 2118 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC010894.1-201ENST00000313760 361 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RNA5SP308-201ENST00000362532 115 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RNU1-5P-201ENST00000362684 144 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RNU105B-201ENST00000364478 208 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL161742.1-201ENST00000418154 584 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 NMD3P2-201ENST00000421815 761 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC092646.1-201ENST00000427142 901 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RPL5P25-201ENST00000441148 775 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL158214.1-201ENST00000444423 404 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RN7SL552P-201ENST00000462094 276 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RPS10P28-201ENST00000480396 498 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL079303.1-201ENST00000486611 463 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC093664.1-201ENST00000511779 289 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC093816.1-201ENST00000515076 913 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RN7SL131P-201ENST00000579043 256 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL022394.1-201ENST00000606979 292 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 Z93930.3-201ENST00000607919 749 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 AL008582.1-201ENST00000609612 442 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 Z83820.1-201ENST00000456978 1499 ntBASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.81□□□□□ -1.64
RCL1Q9Y2P8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC245100.2-201ENST00000454544 1679 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 RNA5SP429-201ENST00000363688 109 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL589994.1-201ENST00000404962 340 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL353133.1-201ENST00000407695 401 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL139100.1-201ENST00000408001 498 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 RNU2-22P-201ENST00000411266 212 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 GTF3AP6-201ENST00000432585 986 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 FTLP19-201ENST00000433300 394 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms