Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 LINC00557-201ENST00000563184 1279 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AC007346.1-201ENST00000569208 867 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 BNIP3P27-201ENST00000599991 412 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AC087468.1-201ENST00000604365 630 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AC091193.1-201ENST00000604640 448 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AL132640.3-201ENST00000630473 177 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 RNF19BPY-201ENST00000458209 1550 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AC007159.1-201ENST00000566529 4706 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AL591135.1-201ENST00000401578 5914 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 AL662795.2-201ENST00000624252 3706 ntBASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSX2IPQ9Y2D8 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC007064.3-201ENST00000422608 359 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 KIF4CP-201ENST00000422742 1279 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 NAP1L4P2-201ENST00000425958 899 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AL590762.3-201ENST00000436372 640 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 RPS15AP29-201ENST00000445539 400 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 VN1R48P-201ENST00000448149 1036 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 PPIAP7-201ENST00000454070 489 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 OR2AF1P-201ENST00000454899 889 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 MTCYBP14-201ENST00000457471 715 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 RPL7P51-201ENST00000490532 749 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 IGLV3-6-201ENST00000523937 250 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AP000620.1-201ENST00000527147 504 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AP003396.4-201ENST00000527574 265 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 OR4A6P-201ENST00000534364 970 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 NANOGNBP2-201ENST00000544753 553 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 HMGN2P47-201ENST00000559378 272 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 MRPL57P1-201ENST00000621486 265 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC026124.2-201ENST00000621847 656 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC023510.2-201ENST00000622162 746 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC025809.2-201ENST00000625085 1802 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 AC005261.2-201ENST00000593427 4258 ntBASIC6.75□□□□□ -1.33
SSX2IPQ9Y2D8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 CASC19-238ENST00000641523 1558 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC010624.4-201ENST00000597606 1351 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AP003170.5-201ENST00000397185 335 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL023284.3-201ENST00000407767 334 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 GTF3AP1-201ENST00000416942 1004 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL139415.1-201ENST00000424862 352 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 RPL12P16-201ENST00000431098 498 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC074367.1-201ENST00000438685 1125 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 H3F3BP1-201ENST00000440551 403 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 ATP5LP2-201ENST00000440646 311 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms