Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC024558.1-201ENST00000505008 528 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC090510.2-201ENST00000617465 629 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 GAPDHP42-201ENST00000406848 981 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 NIFKP3-201ENST00000417799 865 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AL133173.1-201ENST00000423458 397 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC021146.10-201ENST00000515628 706 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AL121594.2-201ENST00000541658 472 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AL359513.1-201ENST00000614364 557 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 AP001784.1-201ENST00000624107 428 ntBASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.63□□□□□ -1.03
SHANK2Q9UPX8 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 AC025470.1-201ENST00000510053 2032 ntBASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 AL671862.1-201ENST00000515851 349 ntBASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 AC012616.1-201ENST00000600294 197 ntBASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 AL118522.2-201ENST00000616045 615 ntBASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SHANK2Q9UPX8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 SRSF1P1-201ENST00000424058 520 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 EIF2S2P3-201ENST00000428356 999 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 RN7SL172P-201ENST00000460535 303 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 RPL7AP6-201ENST00000477943 801 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 AC087672.1-201ENST00000479876 766 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 AC074050.1-201ENST00000563247 211 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 AL139407.1-201ENST00000613826 1175 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 AL390318.1-201ENST00000624564 687 ntBASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.61□□□□□ -1.03
SHANK2Q9UPX8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms