Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AF287957.1-201ENST00000607368 1595 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC024651.2-201ENST00000562480 2098 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 OR2W4P-201ENST00000406496 926 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 RPL34P27-201ENST00000428810 349 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 NDUFS5P5-201ENST00000437256 321 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 BX679664.2-201ENST00000439282 283 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC103563.5-201ENST00000455643 364 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 UBFD1P1-201ENST00000473259 814 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SCARNA21.2-201ENST00000516600 166 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 RNU6-362P-201ENST00000516736 90 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC092865.1-201ENST00000544395 1023 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC010615.3-201ENST00000597319 394 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC011416.1-201ENST00000514947 1732 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC123769.1-201ENST00000530992 3192 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 AC083837.1-201ENST00000565297 2994 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 MTCO1P11-201ENST00000429111 1528 ntBASIC6.86□□□□□ -1.31
HDAC6Q9UBN7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AL445238.1-204ENST00000400311 463 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC079355.1-201ENST00000421770 223 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 RPL12P12-201ENST00000424633 501 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 GAPDHP23-201ENST00000444823 993 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AL161636.2-201ENST00000445179 927 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 RSL24D1P2-201ENST00000445584 366 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC092967.1-201ENST00000449016 481 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 VN1R38P-201ENST00000450265 887 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 RN7SL273P-201ENST00000481561 299 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC027544.3-201ENST00000535082 757 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 EIF1AXP2-201ENST00000555940 413 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC007494.1-201ENST00000562293 760 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 OR4H6P-201ENST00000563771 921 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 BX323046.1-201ENST00000610145 535 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 MIR6809-201ENST00000612189 116 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 AC022726.2-201ENST00000634673 547 ntBASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC6Q9UBN7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 RNA5SP478-201ENST00000364657 115 ntBASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.84□□□□□ -1.31
HDAC6Q9UBN7 MIR1203-201ENST00000408812 85 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms