Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 RPSAP37-201ENST00000470913 821 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC099340.1-201ENST00000475247 599 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC116562.1-201ENST00000485355 781 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC010374.1-201ENST00000503762 1237 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AL390198.2-201ENST00000510553 222 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 OR52H2P-201ENST00000514607 902 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 CHEK2P2-201ENST00000554701 672 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC067852.5-201ENST00000589299 310 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF92P3-201ENST00000596594 954 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC005252.1-201ENST00000604518 1063 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC073387.2-201ENST00000604797 784 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC025588.2-201ENST00000604851 466 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 MIR6849-201ENST00000618543 69 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC004943.3-201ENST00000624116 600 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 NEK2P4-201ENST00000425793 1329 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AL512310.3-201ENST00000547023 1335 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 OLMALINC-203ENST00000641087 3779 ntBASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PPARGC1AQ9UBK2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 MIR513B-201ENST00000385136 84 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 NACAP7-201ENST00000407371 609 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RN7SKP296-201ENST00000411185 341 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 HSFY4P-201ENST00000415994 1181 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RPS7P12-201ENST00000422385 582 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 BX119321.1-201ENST00000428912 797 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RPL31P11-202ENST00000454082 372 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC010468.1-201ENST00000461022 817 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RPL5P33-201ENST00000487833 905 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RN7SL561P-201ENST00000488553 281 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC134050.1-201ENST00000495088 933 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 RPL21P131-201ENST00000497298 483 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC026414.1-201ENST00000504046 698 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC131935.1-201ENST00000524621 333 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC023050.2-201ENST00000544968 387 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AL442163.2-201ENST00000553912 710 ntBASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
PPARGC1AQ9UBK2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms