Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 MAPK10-383ENST00000642032 3390 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC007406.5-201ENST00000570140 3170 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6□□□□□ -1.45
LRFN1Q9P244 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC083806.2-201ENST00000617795 2685 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
LRFN1Q9P244 OR4K17-201ENST00000315543 1032 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6□□□□□ -1.45
LRFN1Q9P244 RNU6-252P-201ENST00000363232 107 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
LRFN1Q9P244 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6□□□□□ -1.45
LRFN1Q9P244 RPL5P20-201ENST00000403848 896 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 RNA5SP115-201ENST00000411160 107 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 TATDN1P1-201ENST00000414123 891 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AL158827.1-201ENST00000416300 391 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 VN1R20P-201ENST00000425215 966 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 Z68868.1-201ENST00000429048 544 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AC079807.1-201ENST00000429993 481 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6□□□□□ -1.45
LRFN1Q9P244 RPS10P18-201ENST00000442662 495 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 COX4I1P2-201ENST00000447446 547 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 CCNJP2-201ENST00000457810 1163 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AC107015.1-201ENST00000466902 747 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6□□□□□ -1.45
LRFN1Q9P244 H3F3AP3-201ENST00000497682 407 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AC018645.1-201ENST00000505003 109 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AC112484.3-201ENST00000505910 329 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6□□□□□ -1.45
LRFN1Q9P244 MTHFD2P4-201ENST00000515074 1025 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6□□□□□ -1.45
LRFN1Q9P244 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6□□□□□ -1.45
LRFN1Q9P244 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 SOX5P1-201ENST00000524155 1127 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 NDUFA5P11-201ENST00000567995 343 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6□□□□□ -1.45
LRFN1Q9P244 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC005034.4-201ENST00000603612 899 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AL135786.2-201ENST00000608422 615 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
LRFN1Q9P244 AL137246.2-201ENST00000613439 662 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6□□□□□ -1.45
LRFN1Q9P244 AL359742.1-201ENST00000622497 540 ntBASIC6□□□□□ -1.45
LRFN1Q9P244 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6□□□□□ -1.45
LRFN1Q9P244 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6□□□□□ -1.45
LRFN1Q9P244 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6□□□□□ -1.45
LRFN1Q9P244 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LRFN1Q9P244 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
LRFN1Q9P244 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms