Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL20A1Q9P218 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.87□□□□□ -1.31
COL20A1Q9P218 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 RN7SKP69-201ENST00000365390 305 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 RNA5SP284-201ENST00000384547 118 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL589994.1-201ENST00000404962 340 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 SNRPEP6-201ENST00000407465 277 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 PTCD2P2-201ENST00000415579 1095 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AC245884.2-201ENST00000426257 404 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 MTND4LP14-201ENST00000429447 288 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL606490.8-201ENST00000441624 319 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 BMS1P10-201ENST00000443754 1120 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 OR13K1P-201ENST00000444577 975 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AP006222.1-205ENST00000450734 457 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 RN7SL101P-201ENST00000496350 279 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 SETP21-201ENST00000514799 892 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AC012146.2-201ENST00000576545 416 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL391001.1-201ENST00000602747 715 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL136131.3-201ENST00000607600 188 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 AC006249.1-201ENST00000621223 471 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 AL021877.2-201ENST00000624442 10684 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AC012254.3-201ENST00000591183 2117 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL20A1Q9P218 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
COL20A1Q9P218 AC027088.4-201ENST00000611559 1947 ntBASIC6.86□□□□□ -1.31
COL20A1Q9P218 Z93929.1-201ENST00000418200 1475 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 SELENOWP1-201ENST00000322792 252 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 OR10R3P-201ENST00000361688 942 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 RNA5SP435-201ENST00000364044 108 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AL512422.1-201ENST00000407033 553 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AL353626.3-201ENST00000413399 657 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 EEF1B2P8-201ENST00000414101 671 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC074367.1-201ENST00000438685 1125 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL20A1Q9P218 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 PPIAP20-201ENST00000449839 135 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 OR2AF1P-201ENST00000454899 889 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AL022319.1-201ENST00000458183 1167 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC023245.1-201ENST00000468501 517 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 PPIAP19-201ENST00000486414 492 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 MTND3P24-201ENST00000506306 329 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 RN7SKP98-201ENST00000517070 156 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 OR10D4P-201ENST00000525892 951 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 OR4A46P-201ENST00000527255 933 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AP000648.1-201ENST00000529682 397 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 OR4R2P-201ENST00000530815 597 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 PCNAP4-201ENST00000532690 730 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC027544.3-201ENST00000535082 757 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 CR383656.14-201ENST00000551951 406 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC006530.1-201ENST00000555980 571 ntBASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.85□□□□□ -1.31
COL20A1Q9P218 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms