Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 MAPK10-261ENST00000641050 3109 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC027279.4-201ENST00000624371 2072 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 MAPK10-270ENST00000641102 3538 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC025470.1-201ENST00000510053 2032 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 RNU1-136P-201ENST00000384181 164 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 MIR130A-201ENST00000385274 89 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC087752.1-201ENST00000391360 558 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 OR7E116P-201ENST00000448529 957 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 RNU1-88P-201ENST00000459274 128 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 RN7SL57P-201ENST00000493687 290 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 SETP21-201ENST00000514799 892 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 RNA5SP473-201ENST00000516402 125 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 RNA5SP438-201ENST00000516561 112 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC015712.7-201ENST00000615211 635 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC010329.1-201ENST00000593903 8328 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC117409.1-201ENST00000470499 1310 ntBASIC6.22□□□□□ -1.41
SIX2Q9NPC8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.22□□□□□ -1.41
SIX2Q9NPC8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SIX2Q9NPC8 AC006206.1-201ENST00000544842 3387 ntBASIC6.21□□□□□ -1.41
SIX2Q9NPC8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SIX2Q9NPC8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.21□□□□□ -1.41
SIX2Q9NPC8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SIX2Q9NPC8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 BX323845.3-201ENST00000428215 527 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC118758.1-202ENST00000454719 225 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AL122020.1-201ENST00000472287 459 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 DUTP1-201ENST00000493631 470 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 Y_RNA.667-201ENST00000516212 107 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC105036.1-201ENST00000566222 271 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC233699.1-201ENST00000569955 1168 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 MIR6780B-201ENST00000610307 79 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC097641.3-201ENST00000613523 464 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC024884.1-201ENST00000620583 399 ntBASIC6.21□□□□□ -1.42
SIX2Q9NPC8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIX2Q9NPC8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AL161912.4-201ENST00000623889 2468 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 VN1R21P-201ENST00000426703 765 ntBASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.2□□□□□ -1.42
SIX2Q9NPC8 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms