Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AP005139.1-201ENST00000580702 1647 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC129502.1-201ENST00000623261 1654 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RNA5SP114-201ENST00000363780 113 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 Y_RNA.472-201ENST00000384322 102 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RNA5SP53-201ENST00000391299 120 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 CXADRP1-201ENST00000398098 1095 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL451061.1-201ENST00000407887 862 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RN7SKP148-201ENST00000410179 275 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 Z68694.1-201ENST00000413929 841 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL356320.2-201ENST00000417263 507 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC245517.2-201ENST00000442890 346 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 TRY2P-201ENST00000448860 689 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RBMY2EP-202ENST00000456360 940 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RNU7-125P-201ENST00000458760 62 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RPL6P9-201ENST00000466502 859 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL157777.1-201ENST00000468100 304 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RPS4XP6-201ENST00000477670 797 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 OR2A3P-201ENST00000493774 953 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 XKRY-201ENST00000510392 1100 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC092593.2-201ENST00000513866 913 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 RN7SL426P-201ENST00000579106 295 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 MIR5010-201ENST00000582846 120 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 SIGLEC31P-201ENST00000594237 551 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 MTCO3P22-201ENST00000603219 784 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AP005212.3-201ENST00000619964 528 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AL157770.1-201ENST00000623049 439 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC092192.1-201ENST00000633154 1018 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 AC243725.1-201ENST00000637164 436 ntBASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 ZNF542P-204ENST00000482727 1305 ntBASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 FO082842.1-201ENST00000423552 1370 ntBASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 AL136531.3-201ENST00000624378 3658 ntBASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.15□□□□□ -1.43
SEC61A2Q9H9S3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms