Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM55Q9BYV6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7□□□□□ -1.29
TRIM55Q9BYV6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7□□□□□ -1.29
TRIM55Q9BYV6 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TRIM55Q9BYV6 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 ZNF876P-202ENST00000398732 1485 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC003973.3-201ENST00000624863 2822 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AP005139.1-201ENST00000580702 1647 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC023886.2-201ENST00000321285 411 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RNA5SP333-201ENST00000363466 118 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RNU4-92P-201ENST00000363783 136 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RNA5SP334-201ENST00000364825 118 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC019178.1-201ENST00000392337 440 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AP000357.1-201ENST00000409926 1165 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AL355862.1-201ENST00000412705 353 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 C1DP1-201ENST00000426049 402 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 HMGB3P10-201ENST00000434734 572 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 NANOGP2-201ENST00000435391 727 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RPS10P14-201ENST00000440748 502 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC092473.1-201ENST00000441098 221 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CASP3P1-201ENST00000446037 609 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RN7SL797P-201ENST00000486314 297 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AP005202.1-201ENST00000489915 867 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC008040.4-201ENST00000494834 768 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC010442.1-201ENST00000515583 816 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 DEFB130C-202ENST00000530001 230 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 OSBPL9P5-201ENST00000542581 171 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 ZNF321P-202ENST00000550843 495 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC023813.2-201ENST00000564321 469 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 ATP5F1P7-201ENST00000567330 760 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 ARGFXP2-201ENST00000579304 949 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC067852.5-201ENST00000589299 310 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 MTND3P19-201ENST00000603825 345 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC104184.1-201ENST00000607513 721 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC007349.4-201ENST00000608114 532 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC011472.4-201ENST00000615848 491 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AC005899.6-201ENST00000620729 297 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 SAMMSON-203ENST00000641005 2168 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 AL512310.3-201ENST00000547023 1335 ntBASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM55Q9BYV6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 AC062029.1-202ENST00000606164 3651 ntBASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM55Q9BYV6 AC073055.1-201ENST00000456901 1621 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms