Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 VN1R31P-201ENST00000417498 730 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 RPS15AP30-201ENST00000420976 390 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC097721.1-201ENST00000427150 1253 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC002504.1-201ENST00000438281 691 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ZNF736P1Y-201ENST00000440402 1276 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 MTND5P8-201ENST00000449817 1083 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC108157.1-201ENST00000510511 539 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC006530.1-201ENST00000555980 571 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC141002.1-201ENST00000607025 279 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 SDR42E1P1-201ENST00000611327 477 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC024255.1-201ENST00000614376 102 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC107980.1-201ENST00000558671 3355 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC092821.3-202ENST00000641304 2767 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 Z83820.1-201ENST00000456978 1499 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 NAMPTP1-201ENST00000440465 2514 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AP002370.1-201ENST00000528055 1602 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AP000641.1-201ENST00000531988 1639 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 MIR365B-201ENST00000362317 111 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC009237.1-201ENST00000442127 744 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC114728.1-201ENST00000488289 483 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 RN7SL466P-201ENST00000497546 295 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC074087.1-201ENST00000512059 724 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 RNU6-319P-201ENST00000516025 108 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 OR10D4P-201ENST00000525892 951 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC074029.2-201ENST00000551045 634 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 DPPA3P2-202ENST00000557188 1219 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AL445649.1-201ENST00000615941 691 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 AC093909.5-201ENST00000621839 1799 ntBASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTFDC1Q9BY42 BIN2P1-201ENST00000504996 1530 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 TNPO1P2-201ENST00000426249 2665 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms