Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 AC025470.1-201ENST00000510053 2032 ntBASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 CRIP1P1-201ENST00000427567 185 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AL354893.1-201ENST00000433735 348 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC005017.1-201ENST00000482002 490 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 MAST4-IT1-201ENST00000514241 658 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 Vault.2-201ENST00000516519 98 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC134669.1-201ENST00000581275 672 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC145423.1-201ENST00000605712 336 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC005828.7-201ENST00000607331 556 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC004801.6-201ENST00000616571 978 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 AC012254.3-201ENST00000591183 2117 ntBASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RSPO3Q9BXY4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 RNA5SP500-201ENST00000364486 119 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 METTL15P3-201ENST00000415522 1221 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 RPL5P7-201ENST00000444235 813 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC097463.1-201ENST00000447288 481 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 PPP1R11P1-201ENST00000486095 376 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 RNA5SP340-201ENST00000517132 107 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC092332.1-201ENST00000563684 829 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AL513327.3-201ENST00000602618 469 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AL445670.1-201ENST00000618889 801 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AP001052.1-201ENST00000626421 99 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AP000432.2-201ENST00000624164 2048 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC009962.1-201ENST00000567327 3813 ntBASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RSPO3Q9BXY4 AC140134.1-201ENST00000511830 3544 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL049634.1-201ENST00000453770 1720 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms