Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC4.25□□□□□ -1.73
LITAFQ99732 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.25□□□□□ -1.73
LITAFQ99732 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 AL122001.1-201ENST00000457027 370 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC117382.1-201ENST00000468074 730 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 PPP1R2P6-201ENST00000478565 588 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 RPL7AP23-201ENST00000482625 776 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC116562.1-201ENST00000485355 781 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.25□□□□□ -1.73
LITAFQ99732 AL390726.2-201ENST00000504791 343 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 MRPL57P6-201ENST00000506570 309 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 NACAP6-201ENST00000509572 622 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 RPS20-202ENST00000518875 671 ntTSL 2 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.25□□□□□ -1.73
LITAFQ99732 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 LDHC-204ENST00000536880 957 ntTSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 CYB5AP5-201ENST00000549779 389 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LITAFQ99732 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 AL356801.1-201ENST00000559320 294 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC023824.3-201ENST00000569003 562 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC013444.2-201ENST00000603317 787 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC073387.2-201ENST00000604797 784 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC008592.5-201ENST00000607856 547 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC093635.1-201ENST00000609028 555 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 FAM27E3-202ENST00000614611 340 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 U6.48-201ENST00000618523 106 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AL035461.2-201ENST00000619201 524 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC079456.1-201ENST00000624010 480 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 AC003992.1-201ENST00000635364 557 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LITAFQ99732 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 ADAM24P-201ENST00000398655 2101 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LITAFQ99732 AP000473.2-201ENST00000602659 1537 ntBASIC4.25□□□□□ -1.73
LITAFQ99732 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LITAFQ99732 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.24□□□□□ -1.73
LITAFQ99732 AC022325.1-201ENST00000502748 2199 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 AL355578.1-201ENST00000607405 1328 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
LITAFQ99732 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 AC006600.2-201ENST00000624834 2506 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LITAFQ99732 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.24□□□□□ -1.73
LITAFQ99732 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 AC226101.1-201ENST00000401483 387 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AL096711.1-201ENST00000404780 554 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 RN7SKP89-201ENST00000410774 242 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.24□□□□□ -1.73
LITAFQ99732 AL356968.2-201ENST00000412769 1257 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AC009237.9-201ENST00000414800 347 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.24□□□□□ -1.73
LITAFQ99732 AL359092.1-201ENST00000417156 265 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.24□□□□□ -1.73
LITAFQ99732 AC008173.1-201ENST00000418901 264 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 NME1P1-201ENST00000420914 382 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AL365338.1-201ENST00000422282 858 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LITAFQ99732 AC068137.1-201ENST00000429272 584 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 IGLV3-4-201ENST00000432300 244 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 AL731534.1-201ENST00000434711 269 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 AC013403.1-201ENST00000436954 263 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LITAFQ99732 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.24□□□□□ -1.73
LITAFQ99732 OR2L9P-201ENST00000444456 913 ntBASIC4.24□□□□□ -1.73
LITAFQ99732 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms