Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC090616.1-201ENST00000583895 447 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 GAS5-AS1-201ENST00000602767 694 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC022022.2-201ENST00000602989 360 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AL591926.1-201ENST00000620542 217 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AP002370.1-201ENST00000528055 1602 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AL359694.2-201ENST00000567753 1615 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AL353743.3-201ENST00000442109 1468 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AL136531.3-201ENST00000624378 3658 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 CCAT2-201ENST00000630920 1752 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 CASC19-246ENST00000641625 1606 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SKP187-201ENST00000365536 330 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 RNU6-316P-201ENST00000391027 107 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC003045.1-201ENST00000398779 713 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 VN1R20P-201ENST00000425215 966 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC073508.1-201ENST00000428866 656 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC023141.6-201ENST00000429418 337 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 VN1R38P-201ENST00000450265 887 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC118758.1-202ENST00000454719 225 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SL552P-201ENST00000462094 276 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SL168P-201ENST00000463821 279 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC022415.1-202ENST00000486612 523 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC024405.1-201ENST00000532521 1042 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC007834.2-201ENST00000536310 343 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC107958.1-201ENST00000556576 290 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 DPPA3P2-202ENST00000557188 1219 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 TPRX1P1-201ENST00000557620 319 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC093524.1-201ENST00000564266 1094 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MIR6806-201ENST00000622141 64 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AP001962.1-201ENST00000624114 559 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 AC013488.1-201ENST00000526618 1838 ntBASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP1Q96SZ6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 SNORD35A-201ENST00000363389 86 ntBASIC6.69□□□□□ -1.34
CDK5RAP1Q96SZ6 SKINT1L-201ENST00000401057 817 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms