Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 QRSL1P1-201ENST00000400977 1540 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC004656.1-201ENST00000568479 4951 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AL096829.1-201ENST00000413677 457 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC079807.1-201ENST00000429993 481 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 KCTD9P1-201ENST00000430462 1167 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AL590004.3-202ENST00000445883 451 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC144530.1-201ENST00000452862 555 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC078899.1-201ENST00000521432 1185 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 NATP-201ENST00000523491 878 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 MRPS21P8-201ENST00000569196 235 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC005726.4-201ENST00000582858 458 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AP005136.2-201ENST00000583253 1049 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC018690.1-201ENST00000608144 626 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AP001437.1-201ENST00000608783 456 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AC073389.3-201ENST00000609434 935 ntBASIC6.09□□□□□ -1.43
C9orf72Q96LT7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
C9orf72Q96LT7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
C9orf72Q96LT7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
C9orf72Q96LT7 AC022325.1-201ENST00000502748 2199 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 VN1R3-201ENST00000418822 919 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 PNKDP1-201ENST00000435914 430 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 OR3D1P-201ENST00000438288 955 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 ZNF619P1-201ENST00000446539 752 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 RPL12P39-201ENST00000455456 496 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 NDUFA5P5-201ENST00000468361 342 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 RNA5SP434-201ENST00000516647 121 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 AC020656.2-201ENST00000613291 5309 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C9orf72Q96LT7 CASC19-260ENST00000641828 2001 ntBASIC6.08□□□□□ -1.44
C9orf72Q96LT7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 HSPD1P9-201ENST00000420325 1636 ntBASIC6.07□□□□□ -1.44
C9orf72Q96LT7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C9orf72Q96LT7 COX6B1P3-201ENST00000312310 260 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms