Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
VMP1Q96GC9 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.02□□□□□ -1.44
VMP1Q96GC9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.02□□□□□ -1.44
VMP1Q96GC9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
VMP1Q96GC9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 LINC01613-201ENST00000561476 2780 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 YWHAZP4-201ENST00000392459 708 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 HMGB3P7-201ENST00000400214 611 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 PSMA6P1-201ENST00000400275 741 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AL023284.3-201ENST00000407767 334 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 RN7SKP161-201ENST00000411110 305 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 THEM7P-201ENST00000419556 672 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 CYCSP52-201ENST00000422857 310 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 RPL7AP10-201ENST00000481016 791 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC091917.2-201ENST00000505002 744 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 SNORA74.1-201ENST00000516320 180 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC018442.3-201ENST00000523025 183 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 CYCSP25-201ENST00000525280 316 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AL133399.1-201ENST00000527476 298 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 RN7SL230P-201ENST00000580835 303 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AP001542.1-201ENST00000591314 200 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC002069.2-201ENST00000603580 883 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AL590410.1-201ENST00000617925 333 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC015722.2-201ENST00000622210 551 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AL121936.2-201ENST00000641935 662 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC140134.1-201ENST00000511830 3544 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 AC015799.1-201ENST00000622996 3122 ntBASIC6.02□□□□□ -1.45
VMP1Q96GC9 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
VMP1Q96GC9 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.02□□□□□ -1.45
VMP1Q96GC9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC125238.2-201ENST00000430003 1440 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 SAGE3P-201ENST00000619800 1635 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 RPSAP32-201ENST00000432681 526 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 RPL31P53-201ENST00000457065 348 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 RPS27P20-201ENST00000492051 246 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC091965.3-201ENST00000506236 208 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 GUSBP9-201ENST00000510138 584 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 IGHV1-14-201ENST00000523391 241 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC121758.1-202ENST00000556917 658 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC018552.1-201ENST00000562099 811 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms