Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP003385.3-201ENST00000472498 287 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 RPL9P33-201ENST00000484311 566 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC120036.3-201ENST00000517826 292 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC087883.1-201ENST00000551882 391 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC012676.3-201ENST00000614983 479 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 CLUHP10-201ENST00000631979 980 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC011471.4-201ENST00000638271 216 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
SHKBP1Q8TBC3 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.34□□□□□ -1.24
SHKBP1Q8TBC3 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SHKBP1Q8TBC3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC102941.1-201ENST00000567616 1537 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RNA5SP382-201ENST00000363355 112 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 SNORD116-12-201ENST00000384468 92 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AL603865.2-201ENST00000401679 213 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AL359715.1-201ENST00000404330 555 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RN7SKP146-201ENST00000410242 334 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC092641.1-201ENST00000440229 772 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 EEF1A1P39-201ENST00000440791 250 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC009263.1-201ENST00000441193 1239 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 SNRPEP8-201ENST00000442866 260 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AL354714.5-201ENST00000450131 590 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RPL7AP71-201ENST00000451120 739 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RPS6P2-201ENST00000454208 705 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AL157777.1-201ENST00000468100 304 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC021074.2-201ENST00000468434 172 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC066616.1-201ENST00000486795 413 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC114324.2-202ENST00000503812 134 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC109471.1-201ENST00000511631 612 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 NBEAP1-201ENST00000554452 979 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC074051.3-201ENST00000570238 358 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 MTND4LP24-201ENST00000572277 291 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC090616.2-202ENST00000584248 222 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC073544.2-201ENST00000601155 540 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC079089.3-201ENST00000603094 673 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC092954.2-201ENST00000609103 430 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 1193.1 ms