Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ANKRD54P1-201ENST00000433115 471 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC016908.1-201ENST00000442571 1219 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 RPL35AP19-201ENST00000469425 329 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC023310.2-201ENST00000553844 547 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 MIR212-201ENST00000586026 110 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AL592148.2-201ENST00000612210 372 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AL354976.1-201ENST00000613843 387 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC105227.2-201ENST00000615075 605 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC004836.1-201ENST00000623032 634 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC100871.1-201ENST00000507871 1456 ntBASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPAS4Q8IUM7 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.59□□□□□ -1.2
NPAS4Q8IUM7 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.59□□□□□ -1.2
NPAS4Q8IUM7 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
NPAS4Q8IUM7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC007996.1-201ENST00000620414 2821 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 RN7SKP250-201ENST00000363924 321 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 SNORA7A-201ENST00000384765 139 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 RPL24P7-201ENST00000399435 453 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AL133260.1-201ENST00000405720 405 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 PTP4A1P5-201ENST00000420305 455 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 RPL7AP51-201ENST00000422016 760 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 DEFA9P-201ENST00000433042 285 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 NPM1P23-201ENST00000440193 849 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 MTND4P25-201ENST00000441039 533 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC010878.1-201ENST00000456500 1047 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 CCNJP2-201ENST00000457810 1163 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AP000805.1-201ENST00000471604 784 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC066616.1-201ENST00000486795 413 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC015524.1-201ENST00000491585 472 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC027801.3-201ENST00000515049 698 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 YWHABP2-201ENST00000540201 713 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AL135786.2-201ENST00000608422 615 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 AC018659.2-201ENST00000624690 715 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 CAP1P2-201ENST00000417455 1409 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPAS4Q8IUM7 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms