Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RPS3AP38-201ENST00000435889 763 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL158053.1-201ENST00000441503 453 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 RPL5P10-201ENST00000445207 894 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 OR52I1-201ENST00000450052 1050 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 EIF4E2P2-201ENST00000492033 736 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC018645.1-201ENST00000505003 109 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC093816.1-201ENST00000515076 913 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 RNU6-491P-201ENST00000516099 110 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 DNAJC19P3-201ENST00000594491 331 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL139022.2-201ENST00000606934 443 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 SAMM50P1-201ENST00000455403 1399 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 CDY11P-201ENST00000447168 1651 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 KYNUP3-201ENST00000574386 1341 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 MIR133A2-201ENST00000347538 102 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 SNORA43.1-201ENST00000364863 140 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 SNORA7A-201ENST00000384765 139 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 TRIM60P17-201ENST00000415181 719 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 USP24P1-201ENST00000433802 779 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 NPM1P23-201ENST00000440193 849 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 NPM1P9-201ENST00000453156 844 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 RAB28P2-201ENST00000454299 641 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 RN7SL655P-201ENST00000486087 298 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL079303.1-201ENST00000486611 463 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC009567.2-201ENST00000502989 349 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC026782.2-201ENST00000510845 636 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC093664.1-201ENST00000511779 289 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC027338.1-201ENST00000514840 825 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC097486.1-201ENST00000515331 210 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC068408.1-201ENST00000577406 1144 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 DYNLL1P1-201ENST00000595442 269 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AC005776.1-201ENST00000603164 290 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 AL049840.6-201ENST00000604583 345 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.53□□□□□ -1.52
SHFQ7M4L6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 UGT2B24P-201ENST00000514441 1597 ntBASIC5.53□□□□□ -1.52
SHFQ7M4L6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHFQ7M4L6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms