Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.51□□□□□ -1.53
NHLRC1Q6VVB1 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NHLRC1Q6VVB1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 CCNT2P1-201ENST00000423082 1315 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AL355834.1-201ENST00000556602 3965 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 TRIM60P17-201ENST00000415181 719 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC015977.1-201ENST00000418887 292 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 THEM7P-201ENST00000419556 672 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC106901.1-201ENST00000425086 698 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC092651.1-201ENST00000426110 312 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 MAPRE1P3-201ENST00000435438 796 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC007383.1-201ENST00000445875 636 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC093827.1-201ENST00000480094 861 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 Y_RNA.710-201ENST00000516975 110 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 RNA5SP400-201ENST00000517155 111 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 BCAS2P1-201ENST00000528022 632 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 WBP1LP11-201ENST00000586141 328 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC022387.2-201ENST00000604050 448 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC141002.1-201ENST00000607025 279 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 AL359955.1-201ENST00000455242 3275 ntBASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NHLRC1Q6VVB1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC024651.2-201ENST00000562480 2098 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 GNG5P2-201ENST00000372054 207 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 MTCO1P51-201ENST00000427672 1060 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 GAPDHP34-201ENST00000432112 823 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 AC112187.1-201ENST00000455837 479 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 MTND6P32-201ENST00000457611 483 ntBASIC5.49□□□□□ -1.53
NHLRC1Q6VVB1 OR7E22P-201ENST00000478335 1035 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms