Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RN7SL83P-201ENST00000468131 297 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 RPL5P33-201ENST00000487833 905 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 GM2AP2-201ENST00000491764 562 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC111000.6-201ENST00000514471 709 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC078899.1-201ENST00000521432 1185 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AP002004.1-206ENST00000532441 876 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 CHEK2P2-201ENST00000554701 672 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC139792.1-201ENST00000607051 647 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 MIR8082-201ENST00000612488 81 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AL133243.2-201ENST00000610331 1621 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 MTCO1P46-201ENST00000451639 1491 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 SNORA7A-201ENST00000384765 139 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AL136231.1-201ENST00000429407 730 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC009244.1-201ENST00000450566 258 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AL929410.2-201ENST00000451170 189 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AL354872.1-201ENST00000456361 967 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 NATP-201ENST00000523491 878 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 OR56A7P-201ENST00000524865 941 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC084851.2-201ENST00000530377 364 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 OR4A42P-201ENST00000531397 938 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 NIFKP4-201ENST00000567275 1192 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC092944.2-201ENST00000605443 889 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AL133481.2-203ENST00000607558 139 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC096708.4-201ENST00000620563 552 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 AC005618.4-201ENST00000625053 554 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 FANCD2P2-201ENST00000437591 1400 ntBASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC58Q4VC31 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 CRIP1P1-201ENST00000427567 185 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 NPM1P23-201ENST00000440193 849 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC073072.2-201ENST00000447425 348 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 SDC4P-201ENST00000453285 601 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AL133351.3-201ENST00000454998 193 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 EIF3LP2-201ENST00000457262 807 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AL603882.1-201ENST00000463059 681 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 RN7SL104P-201ENST00000498686 293 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC093664.1-201ENST00000511779 289 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AL671862.1-201ENST00000515851 349 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms