Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDX1P52945 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDX1P52945 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.9□□□□□ -1.47
PDX1P52945 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PDX1P52945 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
PDX1P52945 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDX1P52945 RARSP1-201ENST00000542842 1418 ntBASIC5.9□□□□□ -1.47
PDX1P52945 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.89□□□□□ -1.47
PDX1P52945 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 CCAT2-201ENST00000630920 1752 ntBASIC5.89□□□□□ -1.47
PDX1P52945 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.89□□□□□ -1.47
PDX1P52945 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDX1P52945 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDX1P52945 AL445238.1-204ENST00000400311 463 ntBASIC5.89□□□□□ -1.47
PDX1P52945 AC116036.1-201ENST00000412199 367 ntBASIC5.89□□□□□ -1.47
PDX1P52945 CASKP1-201ENST00000412870 582 ntBASIC5.89□□□□□ -1.47
PDX1P52945 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.89□□□□□ -1.47
PDX1P52945 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.89□□□□□ -1.47
PDX1P52945 NPM1P48-201ENST00000436002 853 ntBASIC5.89□□□□□ -1.47
PDX1P52945 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 AL512637.1-201ENST00000439523 1231 ntBASIC5.89□□□□□ -1.47
PDX1P52945 AC074386.1-201ENST00000476560 767 ntBASIC5.89□□□□□ -1.47
PDX1P52945 RPL5P12-201ENST00000477071 851 ntBASIC5.89□□□□□ -1.47
PDX1P52945 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.89□□□□□ -1.47
PDX1P52945 AC092865.1-201ENST00000544395 1023 ntBASIC5.89□□□□□ -1.47
PDX1P52945 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.89□□□□□ -1.47
PDX1P52945 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.89□□□□□ -1.47
PDX1P52945 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.89□□□□□ -1.47
PDX1P52945 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.89□□□□□ -1.47
PDX1P52945 AC005244.1-201ENST00000582566 339 ntBASIC5.89□□□□□ -1.47
PDX1P52945 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.89□□□□□ -1.47
PDX1P52945 AL137246.2-201ENST00000613439 662 ntBASIC5.89□□□□□ -1.47
PDX1P52945 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
PDX1P52945 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
PDX1P52945 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDX1P52945 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDX1P52945 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 AC007998.4-201ENST00000612496 2533 ntBASIC5.88□□□□□ -1.47
PDX1P52945 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 AC119674.1-202ENST00000641333 1860 ntBASIC5.88□□□□□ -1.47
PDX1P52945 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PDX1P52945 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.88□□□□□ -1.47
PDX1P52945 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
PDX1P52945 SNORA43.1-201ENST00000364863 140 ntBASIC5.88□□□□□ -1.47
PDX1P52945 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 SNORA70H-201ENST00000383910 135 ntBASIC5.88□□□□□ -1.47
PDX1P52945 SNORA70J-201ENST00000384182 135 ntBASIC5.88□□□□□ -1.47
PDX1P52945 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 RN7SKP286-201ENST00000410894 299 ntBASIC5.88□□□□□ -1.47
PDX1P52945 TMA16P2-201ENST00000413187 601 ntBASIC5.88□□□□□ -1.47
PDX1P52945 EEF1B2P8-201ENST00000414101 671 ntBASIC5.88□□□□□ -1.47
PDX1P52945 BMS1P13-201ENST00000417301 885 ntBASIC5.88□□□□□ -1.47
PDX1P52945 RPS7P8-201ENST00000418311 581 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AL035660.1-201ENST00000422041 222 ntBASIC5.88□□□□□ -1.47
PDX1P52945 BX510359.3-201ENST00000422168 306 ntBASIC5.88□□□□□ -1.47
PDX1P52945 UBE2V2P1-201ENST00000434717 398 ntBASIC5.88□□□□□ -1.47
PDX1P52945 SUMO2P3-201ENST00000438311 288 ntBASIC5.88□□□□□ -1.47
PDX1P52945 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.88□□□□□ -1.47
PDX1P52945 DNAJC19P5-201ENST00000443295 316 ntBASIC5.88□□□□□ -1.47
PDX1P52945 BMS1P10-201ENST00000443754 1120 ntBASIC5.88□□□□□ -1.47
PDX1P52945 GAPDHP23-201ENST00000444823 993 ntBASIC5.88□□□□□ -1.47
PDX1P52945 FCF1P7-201ENST00000451185 558 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AC103563.5-201ENST00000455643 364 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AC110749.1-201ENST00000462007 357 ntBASIC5.88□□□□□ -1.47
PDX1P52945 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 MTND3P6-201ENST00000485242 339 ntBASIC5.88□□□□□ -1.47
PDX1P52945 RPS4XP14-201ENST00000493072 781 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AC113398.2-201ENST00000507630 558 ntBASIC5.88□□□□□ -1.47
PDX1P52945 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.88□□□□□ -1.47
PDX1P52945 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.88□□□□□ -1.47
PDX1P52945 ZNF322P1-201ENST00000568013 1209 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.88□□□□□ -1.47
PDX1P52945 SNORD95-201ENST00000579879 68 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AC027229.1-201ENST00000583887 253 ntBASIC5.88□□□□□ -1.47
PDX1P52945 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.88□□□□□ -1.47
PDX1P52945 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.88□□□□□ -1.47
PDX1P52945 AC006924.1-201ENST00000610750 559 ntBASIC5.88□□□□□ -1.47
PDX1P52945 AL591135.1-201ENST00000401578 5914 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms