Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DUTP1-201ENST00000493631 470 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 SNRPCP2-201ENST00000504370 475 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC10.13□□□□□ -0.79
SMARCA4P51532 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC10.13□□□□□ -0.79
SMARCA4P51532 AC127381.1-201ENST00000555979 939 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC10.13□□□□□ -0.79
SMARCA4P51532 CDC42EP3P1-201ENST00000601004 764 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 AC104785.1-201ENST00000603220 588 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 CYP4F35P-202ENST00000636121 390 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SMARCA4P51532 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA4P51532 MFSD8-239ENST00000641590 2479 ntBASIC10.13□□□□□ -0.79
SMARCA4P51532 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
SMARCA4P51532 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC10.12□□□□□ -0.79
SMARCA4P51532 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
SMARCA4P51532 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA4P51532 RNU6ATAC7P-201ENST00000408111 127 ntBASIC10.12□□□□□ -0.79
SMARCA4P51532 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC10.12□□□□□ -0.79
SMARCA4P51532 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC10.12□□□□□ -0.79
SMARCA4P51532 RPS11P7-201ENST00000442125 465 ntBASIC10.12□□□□□ -0.79
SMARCA4P51532 AC109462.1-201ENST00000491087 368 ntBASIC10.12□□□□□ -0.79
SMARCA4P51532 GSTP1P1-201ENST00000548078 319 ntBASIC10.12□□□□□ -0.79
SMARCA4P51532 IGLCOR22-2-201ENST00000605398 313 ntBASIC10.12□□□□□ -0.79
SMARCA4P51532 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA4P51532 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA4P51532 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA4P51532 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
SMARCA4P51532 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA4P51532 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC10.12□□□□□ -0.79
SMARCA4P51532 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SMARCA4P51532 GNAS-202ENST00000306090 477 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA4P51532 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC10.11□□□□□ -0.79
SMARCA4P51532 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA4P51532 RPS3AP41-201ENST00000462701 778 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 RPS29P22-201ENST00000472363 168 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 OR51K1P-201ENST00000510214 950 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 MIR2117-201ENST00000516780 80 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 DPPA3P2-202ENST00000557188 1219 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA4P51532 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA4P51532 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA4P51532 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
SMARCA4P51532 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA4P51532 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA4P51532 AC005224.3-201ENST00000584683 2140 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10.11□□□□□ -0.79
SMARCA4P51532 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA4P51532 MIR141-201ENST00000384975 95 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA4P51532 AC007562.1-201ENST00000421819 517 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMARCA4P51532 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC10.11□□□□□ -0.79
SMARCA4P51532 AL360081.1-201ENST00000428299 555 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AK3P5-201ENST00000432033 519 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AC023274.2-201ENST00000445264 521 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AC007686.1-201ENST00000488511 463 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AC105233.1-201ENST00000498840 781 ntBASIC10.11□□□□□ -0.79
SMARCA4P51532 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC10.11□□□□□ -0.79
SMARCA4P51532 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC10.11□□□□□ -0.79
SMARCA4P51532 TEX41-254ENST00000626394 423 ntTSL 5 BASIC10.11□□□□□ -0.79
SMARCA4P51532 POT1-202ENST00000393329 3950 ntTSL 5 BASIC10.1□□□□□ -0.79
SMARCA4P51532 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC10.1□□□□□ -0.79
SMARCA4P51532 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC10.1□□□□□ -0.79
SMARCA4P51532 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC10.1□□□□□ -0.79
SMARCA4P51532 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 TMEM75-201ENST00000624314 2165 ntBASIC10.1□□□□□ -0.79
SMARCA4P51532 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SMARCA4P51532 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
SMARCA4P51532 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SMARCA4P51532 AC105399.1-202ENST00000447303 205 ntBASIC10.1□□□□□ -0.79
SMARCA4P51532 AZGP1P2-201ENST00000454506 345 ntBASIC10.1□□□□□ -0.79
SMARCA4P51532 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC10.1□□□□□ -0.79
SMARCA4P51532 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC10.1□□□□□ -0.79
SMARCA4P51532 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC10.1□□□□□ -0.79
SMARCA4P51532 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC10.1□□□□□ -0.79
SMARCA4P51532 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMARCA4P51532 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA4P51532 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 RN7SKP151-201ENST00000410230 316 ntBASIC10.09□□□□□ -0.79
SMARCA4P51532 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 TMA16P2-201ENST00000413187 601 ntBASIC10.09□□□□□ -0.79
SMARCA4P51532 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC10.09□□□□□ -0.79
SMARCA4P51532 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 RPS18P6-201ENST00000476880 458 ntBASIC10.09□□□□□ -0.79
SMARCA4P51532 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC10.09□□□□□ -0.79
SMARCA4P51532 MAL2-208ENST00000523307 556 ntTSL 4 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms