Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL683826.1-201ENST00000624104 627 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AL357562.1-201ENST00000624911 609 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC073488.3-201ENST00000631611 778 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC008627.1-201ENST00000517511 1704 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1A1P48729 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 SNORA51.9-201ENST00000384295 124 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 RNU11-201ENST00000387069 134 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RBMY2AP-201ENST00000445405 1157 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RBMY2CP-201ENST00000448575 1157 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 RBMY2DP-202ENST00000448881 1157 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 RBMY2BP-202ENST00000451071 1156 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 SDC4P-201ENST00000453285 601 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC104339.1-201ENST00000465478 348 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AL158068.1-201ENST00000506116 616 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 HSD3BP3-201ENST00000514706 994 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC110056.1-201ENST00000525759 911 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC084121.1-201ENST00000533882 835 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AL845552.1-201ENST00000556820 323 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AL360012.1-201ENST00000602813 131 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC092266.1-201ENST00000610958 165 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 MAPK10-350ENST00000641777 965 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1A1P48729 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1A1P48729 ZNF101P1-201ENST00000435701 1720 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSNK1A1P48729 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 CAP1P2-201ENST00000417455 1409 ntBASIC5.31□□□□□ -1.56
CSNK1A1P48729 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CSNK1A1P48729 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC012254.3-201ENST00000591183 2117 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 RNU1-65P-201ENST00000363919 148 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 RNA5SP211-201ENST00000365516 117 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC099677.3-201ENST00000427081 395 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 AL445466.1-201ENST00000448432 357 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC009963.4-201ENST00000448535 339 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC090058.1-201ENST00000498788 435 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC026782.2-201ENST00000510845 636 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 RN7SKP35-201ENST00000517210 151 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 BCAS2P1-201ENST00000528022 632 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 OR4A42P-201ENST00000531397 938 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms