Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
KRT6CP48668 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.85□□□□□ -1.47
KRT6CP48668 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
KRT6CP48668 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
KRT6CP48668 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT6CP48668 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.84□□□□□ -1.47
KRT6CP48668 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT6CP48668 PARP4P2-201ENST00000446672 3326 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT6CP48668 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT6CP48668 RPL12P12-201ENST00000424633 501 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT6CP48668 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRT6CP48668 PSMD10P2-201ENST00000432890 672 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AL354893.1-201ENST00000433735 348 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT6CP48668 RPS3AP38-201ENST00000435889 763 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AC010086.1-201ENST00000437359 1052 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 ARMC4P1-201ENST00000438905 707 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC099670.1-201ENST00000455141 783 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 RARRES2P3-201ENST00000457739 473 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 ACA64.4-201ENST00000459070 127 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 H3F3AP5-201ENST00000475267 429 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT6CP48668 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC021269.1-201ENST00000526860 705 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
KRT6CP48668 AC244502.2-201ENST00000543361 851 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 WBP1LP11-201ENST00000586141 328 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 RPSAP75-201ENST00000605848 301 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC010325.3-201ENST00000641084 394 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 AC138627.1-204ENST00000641894 765 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
KRT6CP48668 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.84□□□□□ -1.47
KRT6CP48668 AC005005.4-201ENST00000623789 16698 ntBASIC5.84□□□□□ -1.47
KRT6CP48668 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.84□□□□□ -1.48
KRT6CP48668 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
KRT6CP48668 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.84□□□□□ -1.48
KRT6CP48668 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT6CP48668 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT6CP48668 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT6CP48668 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
KRT6CP48668 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
KRT6CP48668 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRT6CP48668 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT6CP48668 AL513548.1-201ENST00000562904 1724 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT6CP48668 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT6CP48668 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
KRT6CP48668 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
KRT6CP48668 OR10R3P-201ENST00000361688 942 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.83□□□□□ -1.48
KRT6CP48668 AL096829.1-201ENST00000413677 457 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 RPL35AP31-201ENST00000418340 337 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 VN1R20P-201ENST00000425215 966 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRT6CP48668 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 AL356121.1-201ENST00000442911 156 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 AC004890.1-201ENST00000461005 181 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 RN7SL836P-201ENST00000476140 296 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 AC083795.1-201ENST00000491760 320 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.83□□□□□ -1.48
KRT6CP48668 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 RNU6-943P-201ENST00000516960 98 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 NPIPB14P-203ENST00000532298 987 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.83□□□□□ -1.48
KRT6CP48668 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT6CP48668 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.83□□□□□ -1.48
KRT6CP48668 AC006363.1-201ENST00000603806 463 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 AL713998.2-201ENST00000604538 1198 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 AL356752.1-201ENST00000615844 593 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.83□□□□□ -1.48
KRT6CP48668 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.83□□□□□ -1.48
KRT6CP48668 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
KRT6CP48668 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms