Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.15□□□□□ -1.59
CDX1P47902 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.15□□□□□ -1.59
CDX1P47902 AC067904.2-201ENST00000517322 1283 ntBASIC5.15□□□□□ -1.59
CDX1P47902 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.15□□□□□ -1.59
CDX1P47902 BCAS2P1-201ENST00000528022 632 ntBASIC5.15□□□□□ -1.59
CDX1P47902 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 AL162632.2-201ENST00000553933 399 ntBASIC5.15□□□□□ -1.59
CDX1P47902 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.15□□□□□ -1.59
CDX1P47902 AC037479.1-201ENST00000558361 625 ntBASIC5.15□□□□□ -1.59
CDX1P47902 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.15□□□□□ -1.59
CDX1P47902 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.15□□□□□ -1.59
CDX1P47902 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 AP005131.7-201ENST00000610087 611 ntBASIC5.15□□□□□ -1.59
CDX1P47902 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.15□□□□□ -1.59
CDX1P47902 AC015660.5-201ENST00000623238 564 ntBASIC5.15□□□□□ -1.59
CDX1P47902 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.15□□□□□ -1.59
CDX1P47902 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CDX1P47902 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 AC074141.1-201ENST00000588129 2995 ntBASIC5.15□□□□□ -1.59
CDX1P47902 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.15□□□□□ -1.59
CDX1P47902 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 PARP4P2-201ENST00000446672 3326 ntBASIC5.15□□□□□ -1.59
CDX1P47902 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 AL121768.1-201ENST00000613917 2544 ntBASIC5.15□□□□□ -1.59
CDX1P47902 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDX1P47902 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.14□□□□□ -1.59
CDX1P47902 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 SNORA27.3-201ENST00000364937 134 ntBASIC5.14□□□□□ -1.59
CDX1P47902 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 RN7SKP161-201ENST00000411110 305 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AL359092.1-201ENST00000417156 265 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.14□□□□□ -1.59
CDX1P47902 AC092601.1-201ENST00000444526 383 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC007383.1-201ENST00000445875 636 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 SULT1D1P-201ENST00000458020 882 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC098818.1-201ENST00000478593 252 ntBASIC5.14□□□□□ -1.59
CDX1P47902 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC093870.1-201ENST00000506837 213 ntBASIC5.14□□□□□ -1.59
CDX1P47902 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.14□□□□□ -1.59
CDX1P47902 ACTR6P1-201ENST00000514311 1104 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC020937.1-201ENST00000519677 1013 ntBASIC5.14□□□□□ -1.59
CDX1P47902 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 IGHV1-14-201ENST00000523391 241 ntBASIC5.14□□□□□ -1.59
CDX1P47902 IGLV3-6-201ENST00000523937 250 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.14□□□□□ -1.59
CDX1P47902 TDGP1-201ENST00000543961 1229 ntBASIC5.14□□□□□ -1.59
CDX1P47902 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.14□□□□□ -1.59
CDX1P47902 AC092718.4-201ENST00000566639 716 ntBASIC5.14□□□□□ -1.59
CDX1P47902 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.14□□□□□ -1.59
CDX1P47902 FAM106CP-201ENST00000582212 507 ntBASIC5.14□□□□□ -1.59
CDX1P47902 SYPL1P2-201ENST00000582878 727 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC011921.2-201ENST00000589465 152 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AL049840.5-201ENST00000602827 552 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 AC007620.3-201ENST00000608131 497 ntBASIC5.14□□□□□ -1.59
CDX1P47902 AC068726.1-201ENST00000610993 341 ntBASIC5.14□□□□□ -1.59
CDX1P47902 MIR6889-201ENST00000613185 59 ntBASIC5.14□□□□□ -1.59
CDX1P47902 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 HSPD1P7-201ENST00000447985 1686 ntBASIC5.14□□□□□ -1.59
CDX1P47902 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms