Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.56□□□□□ -1.52
RFC3P40938 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RFC3P40938 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 AF287957.1-201ENST00000607368 1595 ntBASIC5.56□□□□□ -1.52
RFC3P40938 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 RNA5SP435-201ENST00000364044 108 ntBASIC5.56□□□□□ -1.52
RFC3P40938 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 SNRPEP6-201ENST00000407465 277 ntBASIC5.56□□□□□ -1.52
RFC3P40938 AL354890.1-201ENST00000413730 346 ntBASIC5.56□□□□□ -1.52
RFC3P40938 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.56□□□□□ -1.52
RFC3P40938 CYP4F30P-202ENST00000420048 405 ntBASIC5.56□□□□□ -1.52
RFC3P40938 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.56□□□□□ -1.52
RFC3P40938 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 AC009237.1-201ENST00000442127 744 ntBASIC5.56□□□□□ -1.52
RFC3P40938 PPIAP20-201ENST00000449839 135 ntBASIC5.56□□□□□ -1.52
RFC3P40938 snoU13.29-201ENST00000459370 104 ntBASIC5.56□□□□□ -1.52
RFC3P40938 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 AC092121.1-201ENST00000569452 202 ntBASIC5.56□□□□□ -1.52
RFC3P40938 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 AC027243.2-201ENST00000602530 724 ntBASIC5.56□□□□□ -1.52
RFC3P40938 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RFC3P40938 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RFC3P40938 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC3P40938 AC140479.2-201ENST00000421567 3130 ntBASIC5.56□□□□□ -1.52
RFC3P40938 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.56□□□□□ -1.52
RFC3P40938 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.55□□□□□ -1.52
RFC3P40938 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RFC3P40938 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.55□□□□□ -1.52
RFC3P40938 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFC3P40938 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFC3P40938 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 AC023490.2-201ENST00000359859 470 ntBASIC5.55□□□□□ -1.52
RFC3P40938 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 RNU11-6P-201ENST00000391127 133 ntBASIC5.55□□□□□ -1.52
RFC3P40938 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 BX323845.3-201ENST00000428215 527 ntBASIC5.55□□□□□ -1.52
RFC3P40938 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.55□□□□□ -1.52
RFC3P40938 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 AC005077.1-201ENST00000449226 375 ntBASIC5.55□□□□□ -1.52
RFC3P40938 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.55□□□□□ -1.52
RFC3P40938 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 IGKV3D-34-201ENST00000522638 302 ntBASIC5.55□□□□□ -1.52
RFC3P40938 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 DPPA3P2-202ENST00000557188 1219 ntBASIC5.55□□□□□ -1.52
RFC3P40938 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 MIR3189-201ENST00000578735 73 ntBASIC5.55□□□□□ -1.52
RFC3P40938 MIR3614-201ENST00000581261 86 ntBASIC5.55□□□□□ -1.52
RFC3P40938 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC3P40938 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.55□□□□□ -1.52
RFC3P40938 AL445649.1-201ENST00000615941 691 ntBASIC5.55□□□□□ -1.52
RFC3P40938 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 AL731532.1-201ENST00000623972 4236 ntBASIC5.55□□□□□ -1.52
RFC3P40938 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC3P40938 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC3P40938 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms