Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.85□□□□□ -1.47
SHMT2P34897 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHMT2P34897 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.84□□□□□ -1.47
SHMT2P34897 AC018628.1-201ENST00000624147 3819 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHMT2P34897 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHMT2P34897 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHMT2P34897 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHMT2P34897 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHMT2P34897 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHMT2P34897 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHMT2P34897 AC119674.1-202ENST00000641333 1860 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHMT2P34897 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.84□□□□□ -1.47
SHMT2P34897 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHMT2P34897 NMD3P2-201ENST00000421815 761 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC115283.1-201ENST00000427353 400 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC002069.1-201ENST00000429649 1159 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 RPL12P16-201ENST00000431098 498 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 USP24P1-201ENST00000433802 779 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.84□□□□□ -1.47
SHMT2P34897 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.84□□□□□ -1.47
SHMT2P34897 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.84□□□□□ -1.47
SHMT2P34897 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.84□□□□□ -1.47
SHMT2P34897 AC117394.1-201ENST00000477323 567 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 RNA5SP340-201ENST00000517132 107 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.84□□□□□ -1.47
SHMT2P34897 OR5D2P-201ENST00000524390 911 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC110056.1-201ENST00000525759 911 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.84□□□□□ -1.47
SHMT2P34897 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHMT2P34897 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.84□□□□□ -1.47
SHMT2P34897 AC090826.1-203ENST00000569235 490 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC005244.1-201ENST00000582566 339 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AL138895.2-201ENST00000603019 178 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 AC009120.7-201ENST00000623452 780 ntBASIC5.84□□□□□ -1.47
SHMT2P34897 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
SHMT2P34897 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHMT2P34897 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHMT2P34897 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHMT2P34897 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 AC006600.2-201ENST00000624834 2506 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 AL137141.1-201ENST00000624622 4836 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHMT2P34897 AC140479.2-201ENST00000421567 3130 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHMT2P34897 AL096800.1-201ENST00000405326 893 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 SNRPEP6-201ENST00000407465 277 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.83□□□□□ -1.48
SHMT2P34897 AL365220.1-201ENST00000432923 399 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 TUBB4BP6-201ENST00000437576 479 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 PCNPP2-201ENST00000441651 455 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHMT2P34897 AC023245.1-201ENST00000468501 517 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 CCDC11P1-201ENST00000503137 1162 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 SETP21-201ENST00000514799 892 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.83□□□□□ -1.48
SHMT2P34897 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.83□□□□□ -1.48
SHMT2P34897 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.83□□□□□ -1.48
SHMT2P34897 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHMT2P34897 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.83□□□□□ -1.48
SHMT2P34897 NDUFA5P11-201ENST00000567995 343 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 LINC00556-201ENST00000569603 412 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.83□□□□□ -1.48
SHMT2P34897 AC067773.1-201ENST00000603284 1094 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AC004890.3-201ENST00000605566 1095 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 AL136131.3-201ENST00000607600 188 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.83□□□□□ -1.48
SHMT2P34897 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
SHMT2P34897 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHMT2P34897 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC138907.8-201ENST00000623981 2256 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHMT2P34897 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHMT2P34897 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 SUGT1P2-201ENST00000379452 992 ntBASIC5.82□□□□□ -1.48
SHMT2P34897 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.82□□□□□ -1.48
SHMT2P34897 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHMT2P34897 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.82□□□□□ -1.48
SHMT2P34897 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms