Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC090114.3-201ENST00000479267 829 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A5P29400 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A5P29400 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A5P29400 AC078878.1-201ENST00000539832 958 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A5P29400 CR383656.6-201ENST00000550518 394 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 DPPA3P2-202ENST00000557188 1219 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A5P29400 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A5P29400 AC109583.2-201ENST00000617367 129 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A5P29400 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL4A5P29400 MFSD8-239ENST00000641590 2479 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
COL4A5P29400 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL4A5P29400 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
COL4A5P29400 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 AC112243.1-201ENST00000623949 3851 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 TMEM75-201ENST00000624314 2165 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AP003119.3-201ENST00000566747 4192 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
COL4A5P29400 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 CYB5AP4-201ENST00000396692 399 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AC007562.1-201ENST00000421819 517 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A5P29400 AC023274.2-201ENST00000445264 521 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 YWHABP1-201ENST00000445359 727 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AL035690.1-201ENST00000490892 383 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 DUTP1-201ENST00000493631 470 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.81□□□□□ -1.32
COL4A5P29400 AC073581.1-201ENST00000519036 575 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 SAMMSON-209ENST00000641222 1100 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
COL4A5P29400 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 AC011493.1-201ENST00000596753 1632 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COL4A5P29400 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A5P29400 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A5P29400 RN7SKP103-201ENST00000363848 320 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 FAR2P2-201ENST00000413041 594 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 FAR2P4-202ENST00000425399 584 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AC092017.2-201ENST00000427600 362 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 DSTNP5-201ENST00000427921 523 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AL731534.1-201ENST00000434711 269 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.81□□□□□ -1.32
COL4A5P29400 FTH1P2-201ENST00000466086 412 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 RPL7P6-201ENST00000480903 738 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A5P29400 OR5AZ1P-201ENST00000527448 943 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AC137768.1-201ENST00000549998 553 ntBASIC6.81□□□□□ -1.32
COL4A5P29400 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A5P29400 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL4A5P29400 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COL4A5P29400 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A5P29400 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A5P29400 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A5P29400 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL4A5P29400 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 RNVU1-6-201ENST00000364688 164 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 AL360271.1-201ENST00000395679 510 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 U3.36-201ENST00000408418 213 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms