Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.08□□□□□ -1.28
SMARCA1P28370 BCAS2P1-201ENST00000528022 632 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.08□□□□□ -1.28
SMARCA1P28370 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.08□□□□□ -1.28
SMARCA1P28370 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.08□□□□□ -1.28
SMARCA1P28370 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.08□□□□□ -1.28
SMARCA1P28370 AC090651.1-201ENST00000567865 634 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 AC119403.2-201ENST00000590960 598 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
SMARCA1P28370 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.08□□□□□ -1.28
SMARCA1P28370 AL645933.2-201ENST00000606743 1207 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SMARCA1P28370 AL357562.1-201ENST00000624911 609 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMARCA1P28370 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMARCA1P28370 CAP1P2-201ENST00000417455 1409 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMARCA1P28370 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SMARCA1P28370 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
SMARCA1P28370 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SMARCA1P28370 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SMARCA1P28370 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.08□□□□□ -1.28
SMARCA1P28370 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.08□□□□□ -1.28
SMARCA1P28370 AL354854.1-201ENST00000455940 1363 ntBASIC7.08□□□□□ -1.28
SMARCA1P28370 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SMARCA1P28370 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 COX6B1P3-201ENST00000312310 260 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.07□□□□□ -1.28
SMARCA1P28370 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC069154.1-201ENST00000432914 542 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.07□□□□□ -1.28
SMARCA1P28370 FTLP8-201ENST00000446770 267 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AL353718.1-201ENST00000451028 517 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 CFL1P4-201ENST00000451536 498 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 RPL31P53-201ENST00000457065 348 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AC114728.1-201ENST00000488289 483 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 SUMO2P19-201ENST00000518920 295 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 TOMM20P1-201ENST00000534518 427 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC008507.3-201ENST00000585753 472 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC135803.1-201ENST00000608748 565 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 RFPL4AP6-201ENST00000616792 846 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.07□□□□□ -1.28
SMARCA1P28370 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC093225.1-201ENST00000506867 1408 ntBASIC7.07□□□□□ -1.28
SMARCA1P28370 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.07□□□□□ -1.28
SMARCA1P28370 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.07□□□□□ -1.28
SMARCA1P28370 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SMARCA1P28370 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.07□□□□□ -1.28
SMARCA1P28370 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMARCA1P28370 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 AC024587.1-201ENST00000505925 2157 ntBASIC7.06□□□□□ -1.28
SMARCA1P28370 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMARCA1P28370 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMARCA1P28370 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 AC120036.2-201ENST00000509729 1474 ntBASIC7.06□□□□□ -1.28
SMARCA1P28370 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMARCA1P28370 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.06□□□□□ -1.28
SMARCA1P28370 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SMARCA1P28370 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
SMARCA1P28370 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.06□□□□□ -1.28
SMARCA1P28370 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SMARCA1P28370 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.06□□□□□ -1.28
SMARCA1P28370 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.06□□□□□ -1.28
SMARCA1P28370 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.06□□□□□ -1.28
SMARCA1P28370 AL512504.1-201ENST00000415494 778 ntBASIC7.06□□□□□ -1.28
SMARCA1P28370 RPS7P8-201ENST00000418311 581 ntBASIC7.06□□□□□ -1.28
SMARCA1P28370 MTND4LP7-201ENST00000431728 294 ntBASIC7.06□□□□□ -1.28
SMARCA1P28370 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.06□□□□□ -1.28
SMARCA1P28370 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms