Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
XRCC1P18887 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 AL132875.1-201ENST00000403623 949 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.96□□□□□ -1.46
XRCC1P18887 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 AL731534.1-201ENST00000434711 269 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 RPSAP41-201ENST00000439695 860 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 AL359839.1-201ENST00000451975 1160 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.96□□□□□ -1.46
XRCC1P18887 AC094085.1-201ENST00000468914 584 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.96□□□□□ -1.46
XRCC1P18887 CYP4F27P-201ENST00000514557 494 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.96□□□□□ -1.46
XRCC1P18887 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.96□□□□□ -1.46
XRCC1P18887 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.96□□□□□ -1.46
XRCC1P18887 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.96□□□□□ -1.46
XRCC1P18887 AL645933.2-201ENST00000606743 1207 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 AC096861.1-201ENST00000616652 240 ntBASIC5.96□□□□□ -1.46
XRCC1P18887 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.96□□□□□ -1.46
XRCC1P18887 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
XRCC1P18887 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
XRCC1P18887 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
XRCC1P18887 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.95□□□□□ -1.46
XRCC1P18887 RNU105B-201ENST00000364478 208 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 SNORA11.3-201ENST00000408471 128 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 RN7SKP17-201ENST00000411242 351 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 AL096829.1-201ENST00000413677 457 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.95□□□□□ -1.46
XRCC1P18887 VN1R3-201ENST00000418822 919 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.95□□□□□ -1.46
XRCC1P18887 RPS3AP38-201ENST00000435889 763 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.95□□□□□ -1.46
XRCC1P18887 ZNF619P1-201ENST00000446539 752 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 AC005077.1-201ENST00000449226 375 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.95□□□□□ -1.46
XRCC1P18887 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.95□□□□□ -1.46
XRCC1P18887 AC073594.1-201ENST00000462065 364 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.95□□□□□ -1.46
XRCC1P18887 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 RN7SKP238-201ENST00000516483 249 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 RNA5SP340-201ENST00000517132 107 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.95□□□□□ -1.46
XRCC1P18887 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.95□□□□□ -1.46
XRCC1P18887 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
XRCC1P18887 NANOGNBP2-201ENST00000544753 553 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
XRCC1P18887 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 SNORA11.6-201ENST00000619030 128 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.95□□□□□ -1.46
XRCC1P18887 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.95□□□□□ -1.46
XRCC1P18887 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
XRCC1P18887 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
XRCC1P18887 AP002512.4-202ENST00000641599 4530 ntBASIC5.95□□□□□ -1.46
XRCC1P18887 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.94□□□□□ -1.46
XRCC1P18887 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.94□□□□□ -1.46
XRCC1P18887 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
XRCC1P18887 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.94□□□□□ -1.46
XRCC1P18887 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 SNORD1C-201ENST00000363315 78 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.94□□□□□ -1.46
XRCC1P18887 AC066692.1-201ENST00000421721 457 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.94□□□□□ -1.46
XRCC1P18887 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.94□□□□□ -1.46
XRCC1P18887 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 RPL23AP60-201ENST00000450011 454 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 RN7SL284P-201ENST00000498823 275 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.94□□□□□ -1.46
XRCC1P18887 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 AP004609.2-201ENST00000532177 190 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.94□□□□□ -1.46
XRCC1P18887 AC105036.1-201ENST00000566222 271 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms