Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ARL5AP3-201ENST00000439327 386 ntBASIC7.8□□□□□ -1.16
LIG1P18858 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 AC015864.1-201ENST00000496512 544 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 MTCO1P31-201ENST00000506355 492 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC093325.1-201ENST00000508378 326 ntBASIC7.8□□□□□ -1.16
LIG1P18858 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 MTCYBP37-201ENST00000510642 1133 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC010625.1-201ENST00000511296 403 ntBASIC7.8□□□□□ -1.16
LIG1P18858 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 MRPS33P3-201ENST00000513456 322 ntBASIC7.8□□□□□ -1.16
LIG1P18858 SETP21-201ENST00000514799 892 ntBASIC7.8□□□□□ -1.16
LIG1P18858 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC073581.1-201ENST00000519036 575 ntBASIC7.8□□□□□ -1.16
LIG1P18858 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC005000.1-201ENST00000536192 288 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC002069.2-201ENST00000603580 883 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AL359704.2-201ENST00000604335 521 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC067838.1-201ENST00000606064 577 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC091768.1-201ENST00000609258 930 ntBASIC7.8□□□□□ -1.16
LIG1P18858 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LIG1P18858 PART1_2.1-201ENST00000612397 250 ntBASIC7.8□□□□□ -1.16
LIG1P18858 RN7SL126P-201ENST00000616400 299 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AP005212.3-201ENST00000619964 528 ntBASIC7.8□□□□□ -1.16
LIG1P18858 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.8□□□□□ -1.16
LIG1P18858 FRG1DP-201ENST00000635586 771 ntBASIC7.8□□□□□ -1.16
LIG1P18858 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 CASC19-255ENST00000641733 1385 ntBASIC7.8□□□□□ -1.16
LIG1P18858 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LIG1P18858 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
LIG1P18858 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
LIG1P18858 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 AP000547.3-204ENST00000588548 2523 ntBASIC7.79□□□□□ -1.16
LIG1P18858 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 RNA5SP114-201ENST00000363780 113 ntBASIC7.79□□□□□ -1.16
LIG1P18858 MIR187-201ENST00000385062 109 ntBASIC7.79□□□□□ -1.16
LIG1P18858 RNA5SP53-201ENST00000391299 120 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 RN7SKP268-201ENST00000411107 316 ntBASIC7.79□□□□□ -1.16
LIG1P18858 RNA5SP280-201ENST00000411230 115 ntBASIC7.79□□□□□ -1.16
LIG1P18858 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 AC245060.4-201ENST00000413293 1121 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
LIG1P18858 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.79□□□□□ -1.16
LIG1P18858 LDHAP2-201ENST00000437325 985 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC7.79□□□□□ -1.16
LIG1P18858 AC073052.1-201ENST00000440417 714 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC7.79□□□□□ -1.16
LIG1P18858 MTND2P4-201ENST00000445034 1004 ntBASIC7.79□□□□□ -1.16
LIG1P18858 OR52I1-201ENST00000450052 1050 ntBASIC7.79□□□□□ -1.16
LIG1P18858 OR7E7P-201ENST00000455678 1012 ntBASIC7.79□□□□□ -1.16
LIG1P18858 SULT1D1P-201ENST00000458020 882 ntBASIC7.79□□□□□ -1.16
LIG1P18858 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 RPS16P9-201ENST00000477220 427 ntBASIC7.79□□□□□ -1.16
LIG1P18858 OR7E22P-201ENST00000478335 1035 ntBASIC7.79□□□□□ -1.16
LIG1P18858 RN7SL379P-201ENST00000479912 293 ntBASIC7.79□□□□□ -1.16
LIG1P18858 MTND2P14-201ENST00000482139 351 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 AC114940.1-201ENST00000512162 1265 ntBASIC7.79□□□□□ -1.16
LIG1P18858 IGLVV-66-201ENST00000523818 341 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.79□□□□□ -1.16
LIG1P18858 AP000926.4-201ENST00000527351 454 ntBASIC7.79□□□□□ -1.16
LIG1P18858 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.79□□□□□ -1.16
LIG1P18858 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.79□□□□□ -1.16
LIG1P18858 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 AC027667.1-201ENST00000545814 304 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 AL391156.1-201ENST00000554965 554 ntBASIC7.79□□□□□ -1.16
LIG1P18858 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.79□□□□□ -1.16
LIG1P18858 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LIG1P18858 AC091932.1-201ENST00000569381 427 ntBASIC7.79□□□□□ -1.16
LIG1P18858 MIR378H-201ENST00000579966 83 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.79□□□□□ -1.16
LIG1P18858 SIGLEC31P-201ENST00000594237 551 ntBASIC7.79□□□□□ -1.16
LIG1P18858 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms