Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NCK1P16333 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NCK1P16333 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.51□□□□□ -1.53
NCK1P16333 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NCK1P16333 MIR133A2-201ENST00000347538 102 ntBASIC5.5□□□□□ -1.53
NCK1P16333 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 RN7SKP145-201ENST00000363291 303 ntBASIC5.5□□□□□ -1.53
NCK1P16333 SNORD94-201ENST00000386037 137 ntBASIC5.5□□□□□ -1.53
NCK1P16333 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NCK1P16333 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 RPS27AP6-201ENST00000427962 448 ntBASIC5.5□□□□□ -1.53
NCK1P16333 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 AC234771.4-201ENST00000441416 730 ntBASIC5.5□□□□□ -1.53
NCK1P16333 RPS7P3-201ENST00000443360 580 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AL590004.3-202ENST00000445883 451 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AC023271.1-201ENST00000445936 1090 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AL034369.1-201ENST00000453808 477 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.5□□□□□ -1.53
NCK1P16333 RN7SL197P-201ENST00000466981 299 ntBASIC5.5□□□□□ -1.53
NCK1P16333 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 AC005017.1-201ENST00000482002 490 ntBASIC5.5□□□□□ -1.53
NCK1P16333 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.5□□□□□ -1.53
NCK1P16333 AC008629.2-201ENST00000503783 483 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.5□□□□□ -1.53
NCK1P16333 MRPL57P6-201ENST00000506570 309 ntBASIC5.5□□□□□ -1.53
NCK1P16333 GLUD1P3-202ENST00000508551 200 ntBASIC5.5□□□□□ -1.53
NCK1P16333 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.5□□□□□ -1.53
NCK1P16333 AC134698.1-201ENST00000511619 643 ntBASIC5.5□□□□□ -1.53
NCK1P16333 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.5□□□□□ -1.53
NCK1P16333 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.5□□□□□ -1.53
NCK1P16333 TDGP1-201ENST00000543961 1229 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.5□□□□□ -1.53
NCK1P16333 AC005632.2-201ENST00000564271 828 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.5□□□□□ -1.53
NCK1P16333 TXNP4-201ENST00000575018 310 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AP005136.2-201ENST00000583253 1049 ntBASIC5.5□□□□□ -1.53
NCK1P16333 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 SMIM12P1-201ENST00000603004 274 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AL512430.4-201ENST00000603085 613 ntBASIC5.5□□□□□ -1.53
NCK1P16333 HIRAP1-201ENST00000605318 787 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.5□□□□□ -1.53
NCK1P16333 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.5□□□□□ -1.53
NCK1P16333 AL445670.1-201ENST00000618889 801 ntBASIC5.5□□□□□ -1.53
NCK1P16333 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NCK1P16333 AP000550.3-201ENST00000637734 379 ntBASIC5.5□□□□□ -1.53
NCK1P16333 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.5□□□□□ -1.53
NCK1P16333 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NCK1P16333 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NCK1P16333 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
NCK1P16333 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NCK1P16333 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCK1P16333 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.49□□□□□ -1.53
NCK1P16333 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.49□□□□□ -1.53
NCK1P16333 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.49□□□□□ -1.53
NCK1P16333 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.49□□□□□ -1.53
NCK1P16333 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.49□□□□□ -1.53
NCK1P16333 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCK1P16333 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NCK1P16333 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCK1P16333 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCK1P16333 RNA5SP110-201ENST00000362638 115 ntBASIC5.49□□□□□ -1.53
NCK1P16333 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCK1P16333 SNORA70.6-201ENST00000383934 134 ntBASIC5.49□□□□□ -1.53
NCK1P16333 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.49□□□□□ -1.53
NCK1P16333 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.49□□□□□ -1.53
NCK1P16333 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.49□□□□□ -1.53
NCK1P16333 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.49□□□□□ -1.53
NCK1P16333 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.49□□□□□ -1.53
NCK1P16333 RPSAP51-201ENST00000497462 645 ntBASIC5.49□□□□□ -1.53
NCK1P16333 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.49□□□□□ -1.53
NCK1P16333 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.49□□□□□ -1.53
NCK1P16333 GAPDHP62-201ENST00000515313 990 ntBASIC5.49□□□□□ -1.53
NCK1P16333 AC021146.10-201ENST00000515628 706 ntBASIC5.49□□□□□ -1.53
NCK1P16333 RN7SKP5-201ENST00000517045 272 ntBASIC5.49□□□□□ -1.53
NCK1P16333 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.49□□□□□ -1.53
NCK1P16333 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.49□□□□□ -1.53
NCK1P16333 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.49□□□□□ -1.53
NCK1P16333 AC023310.2-201ENST00000553844 547 ntBASIC5.49□□□□□ -1.53
NCK1P16333 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.49□□□□□ -1.53
NCK1P16333 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
NCK1P16333 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.49□□□□□ -1.53
NCK1P16333 Z93930.3-201ENST00000607919 749 ntBASIC5.49□□□□□ -1.53
NCK1P16333 AC241377.1-201ENST00000619797 406 ntBASIC5.49□□□□□ -1.53
NCK1P16333 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms